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STAR Protocols
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July 13, 2024
Protocol to use protein language models predicting and following experimental validation of function-enhancing variants of thymine-N-glycosylase
Yan He, Xibin Zhou, Fajie Yuan, et al.
Nature Methods
|
November 27, 2025
A comprehensive foundation model for cryo-EM image processing
Yang Yan, Shiqi Fan, Fajie Yuan, et al.
Neural Networks : the Official Journal of the International Neural Network Society
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August 16, 2025
Hypergraph node representation learning with one-stage message passing
Shilin Qu, Weiqing Wang, Yuan-Fang Li, et al.
Briefings in Bioinformatics
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July 15, 2024
Highly accurate classification and discovery of microbial protein-coding gene functions using FunGeneTyper: an extensible deep learning framework
Guoqing Zhang, Hui Wang, Zhiguo Zhang, et al.
IEEE Transactions on Pattern Analysis and Machine Intelligence
|
April 4, 2025
NineRec: A Benchmark Dataset Suite for Evaluating Transferable Recommendation
Jiaqi Zhang, Yu Cheng, Yongxin Ni, et al.
Journal of the American Chemical Society
|
August 25, 2025
NRPStransformer, an Accurate Adenylation Domain Specificity Prediction Algorithm for Genome Mining of Nonribosomal Peptides
Zhihan Zhang, Yuyang Zhou, Shengling Xie, et al.
Nature Biotechnology
|
October 2, 2025
A trimodal protein language model enables advanced protein searches
Jin Su, Yan He, Shiyang You, et al.
Nature Communications
|
April 5, 2025
ESM-Ezy: a deep learning strategy for the mining of novel multicopper oxidases with superior properties
Hui Qian, Yuxuan Wang, Xibin Zhou, et al.
Molecular Cell
|
February 20, 2024
Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing
Yan He, Xibin Zhou, Chong Chang, et al.
Nature Biotechnology
|
October 24, 2025
Democratizing protein language model training, sharing and collaboration
Jin Su, Zhikai Li, Tianli Tao, et al.
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Search research articles
Search
Showing results (1-10 of 10) with videos related to
Sort By:
Page
of 1
STAR Protocols
|
July 13, 2024
Protocol to use protein language models predicting and following experimental validation of function-enhancing variants of thymine-N-glycosylase
Yan He, Xibin Zhou, Fajie Yuan, et al.
Nature Methods
|
November 27, 2025
A comprehensive foundation model for cryo-EM image processing
Yang Yan, Shiqi Fan, Fajie Yuan, et al.
Neural Networks : the Official Journal of the International Neural Network Society
|
August 16, 2025
Hypergraph node representation learning with one-stage message passing
Shilin Qu, Weiqing Wang, Yuan-Fang Li, et al.
Briefings in Bioinformatics
|
July 15, 2024
Highly accurate classification and discovery of microbial protein-coding gene functions using FunGeneTyper: an extensible deep learning framework
Guoqing Zhang, Hui Wang, Zhiguo Zhang, et al.
IEEE Transactions on Pattern Analysis and Machine Intelligence
|
April 4, 2025
NineRec: A Benchmark Dataset Suite for Evaluating Transferable Recommendation
Jiaqi Zhang, Yu Cheng, Yongxin Ni, et al.
Journal of the American Chemical Society
|
August 25, 2025
NRPStransformer, an Accurate Adenylation Domain Specificity Prediction Algorithm for Genome Mining of Nonribosomal Peptides
Zhihan Zhang, Yuyang Zhou, Shengling Xie, et al.
Nature Biotechnology
|
October 2, 2025
A trimodal protein language model enables advanced protein searches
Jin Su, Yan He, Shiyang You, et al.
Nature Communications
|
April 5, 2025
ESM-Ezy: a deep learning strategy for the mining of novel multicopper oxidases with superior properties
Hui Qian, Yuxuan Wang, Xibin Zhou, et al.
Molecular Cell
|
February 20, 2024
Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing
Yan He, Xibin Zhou, Chong Chang, et al.
Nature Biotechnology
|
October 24, 2025
Democratizing protein language model training, sharing and collaboration
Jin Su, Zhikai Li, Tianli Tao, et al.
Page
of 1