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Influenza and Other Respiratory Viruses|September 26, 2023
Use of whole genome sequencing to identify low-frequency mutations in SARS-CoV-2 patients treated with remdesivirKuganya Nirmalarajah, Winfield Yim, Patryk Aftanas, et al.Proceedings. Biological Sciences|November 20, 2015
Molecular diversity and distribution of marine fungi across 130 European environmental samplesThomas A Richards, Guy Leonard, Frédéric Mahé, et al.Proceedings of the National Academy of Sciences of the United States of America|March 8, 2019
Environment-dependent fitness gains can be driven by horizontal gene transfer of transporter-encoding genesDavid S Milner, Victoria Attah, Emily Cook, et al.Microbiology Spectrum|February 13, 2025
Comparison of pharyngeal and invasive isolates of <i>Streptococcus pyogenes</i> by whole-genome sequencing in Toronto, CanadaJoseph J Zeppa, Ellen G Avery, Patryk Aftanas, et al.Proceedings of the National Academy of Sciences of the United States of America|August 12, 2015
Cryptic infection of a broad taxonomic and geographic diversity of tadpoles by Perkinsea protistsAurélie Chambouvet, David J Gower, Miloslav Jirků, et al.Journal of Clinical Virology : the Official Publication of the Pan American Society for Clinical Virology|October 5, 2025
Some assembly required: Comparison of bioinformatic pipelines for analysis of viral metagenomic sequencing from nosocomial respiratory virus outbreaksAssad Alhaboub, Natalie M Deschenes, Xena X Li, et al.JAMA Network Open|July 21, 2023
Prevalence of Low-Frequency, Antiviral Resistance Variants in SARS-CoV-2 Isolates in Ontario, Canada, 2020-2023Calvin P Sjaarda, Lynette Lau, Jared T Simpson, et al.Nature Microbiology|November 27, 2019
Unexpected mitochondrial genome diversity revealed by targeted single-cell genomics of heterotrophic flagellated protistsJeremy G Wideman, Adam Monier, Raquel Rodríguez-Martínez, et al.Open Biology|January 12, 2018
Comparative genomic analysis of the 'pseudofungus' <i>Hyphochytrium catenoides</i>Guy Leonard, Aurélie Labarre, David S Milner, et al.Viruses|August 23, 2020
A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait CaptureJalees A Nasir, Robert A Kozak, Patryk Aftanas, et al.Pageof 6