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BMC Bioinformatics|January 1, 2015
ExpaRNA-P: simultaneous exact pattern matching and folding of RNAsChristina Otto, Mathias Möhl, Steffen Heyne, et al.
Nucleic Acids Research|March 1, 2012
Global or local? Predicting secondary structure and accessibility in mRNAsSita J Lange, Daniel Maticzka, Mathias Möhl, et al.
Plos One|November 17, 2016
5'-Hydroxymethylcytosine Precedes Loss of CpG Methylation in Enhancers and Genes Undergoing Activation in Cardiomyocyte MaturationDavid K Kranzhöfer, Ralf Gilsbach, Björn A Grüning, et al.
Nucleic Acids Research|April 18, 2020
Galaxy HiCExplorer 3: a web server for reproducible Hi-C, capture Hi-C and single-cell Hi-C data analysis, quality control and visualizationJoachim Wolff, Leily Rabbani, Ralf Gilsbach, et al.
Algorithms for Molecular Biology : AMB|April 23, 2013
LocARNAscan: Incorporating thermodynamic stability in sequence and structure-based RNA homology searchSebastian Will, Michael F Siebauer, Steffen Heyne, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics|September 11, 2015
Local Exact Pattern Matching for Non-Fixed RNA StructuresMika Amit, Rolf Backofen, Steffen Heyne, et al.
Plos Pathogens|December 14, 2022
Genome wide CRISPR screen for Pasteurella multocida toxin (PMT) binding proteins reveals LDL Receptor Related Protein 1 (LRP1) as crucial cellular receptorJulian Schoellkopf, Thomas Mueller, Lena Hippchen, et al.
American Journal of Human Genetics|January 10, 2006
Single-nucleotide polymorphisms in NAGNAG acceptors are highly predictive for variations of alternative splicingMichael Hiller, Klaus Huse, Karol Szafranski, et al.
Microlife|January 16, 2026
CoMPaseD: advanced planning of proteomic experiments aiming to identify small proteinsJürgen Bartel, Philipp T Kaulich, Borja Ferrero-Bordera, et al.
Nucleic Acids Research|December 8, 2020
CRISPRidentify: identification of CRISPR arrays using machine learning approachAlexander Mitrofanov, Omer S Alkhnbashi, Sergey A Shmakov, et al.
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