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Cell Reports|December 20, 2025
Characterization of gut microbiomes in rural Honduras reveals uncharacterized species and associations with human genetic variationFrancesco Beghini, Ilana L Brito, Mark Gerstein, et al.Journal of Environmental Management|March 17, 2020
How inoculation affects the development and the performances of microalgal-bacterial consortia treating real municipal wastewaterSerena Petrini, Paola Foladori, Francesco Beghini, et al.The ISME Journal|August 25, 2017
Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiomeFrancesco Beghini, Edoardo Pasolli, Tin Duy Truong, et al.Msystems|May 22, 2026
Metagenomic polymorphic toxin effector and immunity profiling predicts microbiome development and disease-related dysbiosisHunter W Schroer, Francesco Beghini, Juan Antonio Raygoza Garay, et al.Biorxiv : the Preprint Server for Biology|July 17, 2025
Metagenomic polymorphic toxin effector and immunity profiling predicts microbiome development and disease-related dysbiosisHunter W Schroer, Francesco Beghini, Juan Antonio Raygoza Garay, et al.Dermatology and Therapy|September 28, 2023
Thermal Therapy Modulation of the Psoriasis-Associated Skin and Gut MicrobiomeSerena Manara, Francesco Beghini, Giulia Masetti, et al.Cell Reports|July 5, 2024
Environmental, socioeconomic, and health factors associated with gut microbiome species and strains in isolated Honduras villagesShivkumar Vishnempet Shridhar, Francesco Beghini, Marcus Alexander, et al.Nature|November 20, 2024
Gut microbiome strain-sharing within isolated village social networksFrancesco Beghini, Jackson Pullman, Marcus Alexander, et al.Genome Biology|December 30, 2019
Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel speciesSerena Manara, Francesco Asnicar, Francesco Beghini, et al.Annals of Epidemiology|June 2, 2019
Sociodemographic variation in the oral microbiomeAudrey Renson, Heidi E Jones, Francesco Beghini, et al.Pageof 3