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Virus Evolution|December 22, 2023
Evaluation of recombination detection methods for viral sequencingFrederick R Jaya, Barbara P Brito, Aaron E DarlingGenome Biology and Evolution|March 25, 2010
Efficient sampling of parsimonious inversion histories with application to genome rearrangement in YersiniaIstván Miklós, Aaron E DarlingPeerj|July 14, 2018
Local and relaxed clocks: the best of both worldsMathieu Fourment, Aaron E DarlingPeerj|January 25, 2020
Evaluating probabilistic programming and fast variational Bayesian inference in phylogeneticsMathieu Fourment, Aaron E DarlingPlos Computational Biology|October 11, 2021
qc3C: Reference-free quality control for Hi-C sequencing dataMatthew Z DeMaere, Aaron E DarlingGenome Biology|February 28, 2019
bin3C: exploiting Hi-C sequencing data to accurately resolve metagenome-assembled genomesMatthew Z DeMaere, Aaron E DarlingGigascience|November 18, 2017
Sim3C: simulation of Hi-C and Meta3C proximity ligation sequencing technologiesMatthew Z DeMaere, Aaron E DarlingPeerj|November 16, 2016
Deconvoluting simulated metagenomes: the performance of hard- and soft- clustering algorithms applied to metagenomic chromosome conformation capture (3C)Matthew Z DeMaere, Aaron E DarlingPeerj|October 1, 2016
A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeqCatherine M Burke, Aaron E DarlingMicrobiome|July 25, 2023
Expanding the range of the respiratory infectome in Australian feedlot cattle with and without respiratory disease using metatranscriptomicsBarbara P Brito, Melinda J Frost, Kay Anantanawat, et al.Pageof 10