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Bioinformatics (Oxford, England)|May 30, 2019
Smart computational exploration of stochastic gene regulatory network models using human-in-the-loop semi-supervised learningFredrik Wrede, Andreas HellanderBioinformatics (Oxford, England)|July 25, 2020
Scalable machine learning-assisted model exploration and inference using SciopePrashant Singh, Fredrik Wrede, Andreas HellanderIEEE/ACM Transactions on Computational Biology and Bioinformatics|August 30, 2021
Convolutional Neural Networks as Summary Statistics for Approximate Bayesian ComputationMattias AKesson, Prashant Singh, Fredrik Wrede, et al.Plos Computational Biology|January 31, 2022
Identification of dynamic mass-action biochemical reaction networks using sparse Bayesian methodsRichard Jiang, Prashant Singh, Fredrik Wrede, et al.BMC Bioinformatics|June 24, 2021
Accelerated regression-based summary statistics for discrete stochastic systems via approximate simulatorsRichard M Jiang, Fredrik Wrede, Prashant Singh, et al.The Journal of Chemical Physics|April 25, 2008
Efficient computation of transient solutions of the chemical master equation based on uniformization and quasi-Monte CarloAndreas HellanderBioinformatics (Oxford, England)|January 29, 2021
Epidemiological modeling in StochSS Live!Richard Jiang, Bruno Jacob, Matthew Geiger, et al.Bioinformatics (Oxford, England)|December 10, 2009
CellMC--a multiplatform model compiler for the Cell Broadband Engine and x86Emmet Caulfield, Andreas HellanderThe Journal of Chemical Physics|January 24, 2020
Hierarchical algorithm for the reaction-diffusion master equationStefan Hellander, Andreas HellanderThe Journal of Chemical Physics|July 9, 2021
A multiscale compartment-based model of stochastic gene regulatory networks using hitting-time analysisAdrien Coulier, Stefan Hellander, Andreas HellanderPageof 4