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BMC Bioinformatics|October 2, 2015
DMAP: a connectivity map database to enable identification of novel drug repositioning candidatesHui Huang, Thanh Nguyen, Sara Ibrahim, et al.Frontiers in Big Data|October 4, 2021
Statistical Enrichment Analysis of Samples: A General-Purpose Tool to Annotate Metadata Neighborhoods of Biological SamplesThanh M Nguyen, Samuel Bharti, Zongliang Yue, et al.Briefings in Bioinformatics|March 24, 2009
Semantic web for integrated network analysis in biomedicineHuajun Chen, Li Ding, Zhaohui Wu, et al.Frontiers in Big Data|November 21, 2022
WINNER: A network biology tool for biomolecular characterization and prioritizationThanh Nguyen, Zongliang Yue, Radomir Slominski, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|June 11, 2019
Scalable De Novo Genome Assembly Using a Pregel-Like Graph-Parallel SystemGuimu Guo, Hongzhi Chen, Da Yan, et al.Computational Systems Bioinformatics. Computational Systems Bioinformatics Conference|March 21, 2007
A systems biology case study of ovarian cancer drug resistanceJake Y Chen, Changyu Shen, Zhong Yan, et al.Journal of Biological Research (Thessalonike, Greece)|April 18, 2019
A systematic simulation-based meta-analytical framework for prediction of physiological biomarkers in alopeciaSyed Aun Muhammad, Nighat Fatima, Rehan Zafar Paracha, et al.Journal of Bioinformatics and Computational Biology|June 26, 2007
A systems biology approach to the study of cisplatin drug resistance in ovarian cancersJake Y Chen, Zhong Yan, Changyu Shen, et al.Frontiers in Bioinformatics|July 3, 2025
Temporal GeneTerrain: advancing precision medicine through dynamic gene expression visualizationEhsan Saghapour, Rahul Sharma, Delower Hossain, et al.Proceedings. IEEE Computer Society Bioinformatics Conference|February 3, 2006
Initial large-scale exploration of protein-protein interactions in human brainJake Y Chen, Andrey Y Sivachenko, Russell Bell, et al.Pageof 11