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Algorithms for Molecular Biology : AMB|July 17, 2026
Mutational signature refitting on sparse pan-cancer dataGal Gilad, Teresa M Przytycka, Roded Sharan
Bioinformatics Advances|May 4, 2026
An optimization framework for hierarchical clusteringGal Gilad, Roded Sharan
Plos Computational Biology|October 19, 2021
A data-driven approach for constructing mutation categories for mutational signature analysisGal Gilad, Mark D M Leiserson, Roded Sharan
Biorxiv : the Preprint Server for Biology|February 9, 2026
Toward identification of common DNA repair process in mutational signaturesDamian Wójtowicz, Marcin Wierzbiński, Jan Hoinka, et al.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|December 5, 2019
DNA Repair Footprint Uncovers Contribution of DNA Repair Mechanism to Mutational SignaturesDamian Wojtowicz, Mark D M Leiserson, Roded Sharan, et al.
Plos Computational Biology|October 13, 2017
BeWith: A Between-Within method to discover relationships between cancer modules via integrated analysis of mutual exclusivity, co-occurrence and functional interactionsPhuong Dao, Yoo-Ah Kim, Damian Wojtowicz, et al.
Iscience|February 24, 2020
A Sticky Multinomial Mixture Model of Strand-Coordinated Mutational Processes in CancerItay Sason, Damian Wojtowicz, Welles Robinson, et al.
Annual Review of Biomedical Data Science|September 1, 2021
Mutational Signatures: From Methods to MechanismsYoo-Ah Kim, Mark D M Leiserson, Priya Moorjani, et al.
Molecular Biosystems|December 4, 2010
Evolution of domain promiscuity in eukaryotic genomes--a perspective from the inferred ancestral domain architecturesInbar Cohen-Gihon, Jessica H Fong, Roded Sharan, et al.
Genome Medicine|July 28, 2019
Hidden Markov models lead to higher resolution maps of mutation signature activity in cancerDamian Wojtowicz, Itay Sason, Xiaoqing Huang, et al.
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