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Mathematical Biosciences|August 5, 2014
An agent-based modeling framework linking inflammation and cancer using evolutionary principles: description of a generative hierarchy for the hallmarks of cancer and developing a bridge between mechanism and epidemiological dataGary An, Swati Kulkarni
Viruses|August 28, 2021
Comparative Computational Modeling of the Bat and Human Immune Response to Viral Infection with the Comparative Biology Immune Agent Based ModelChase Cockrell, Gary An
Frontiers in Systems Biology|August 14, 2025
Generating synthetic multidimensional molecular time series data for machine learning: considerationsGary An, Chase Cockrell
Methods in Molecular Biology (Clifton, N.J.)|September 9, 2010
Systems biology and inflammationYoram Vodovotz, Gary An
Arxiv|May 20, 2024
A design specification for Critical Illness Digital Twins (CIDTs) to cure sepsis: responding to the National Academies of Sciences, Engineering and Medicine Report "Foundational Research Gaps and Future Directions for Digital Twins"Gary An, Chase Cockrell
Journal of Pharmacokinetics and Pharmacodynamics|August 30, 2014
Agent-based model of fecal microbial transplant effect on bile acid metabolism on suppressing Clostridium difficile infection: an example of agent-based modeling of intestinal bacterial infectionXavier Peer, Gary An
Frontiers in Systems Biology|August 8, 2022
Drug Development Digital Twins for Drug Discovery, Testing and Repurposing: A Schema for Requirements and DevelopmentGary An, Chase Cockrell
BMC Bioinformatics|May 4, 2011
An automated homology-based approach for identifying transposable elementsRyan C Kennedy, Maria F Unger, Scott Christley, et al.
Methods in Molecular Biology (Clifton, N.J.)|May 28, 2021
Agent-Based Modeling of Systemic Inflammation: A Pathway Toward Controlling SepsisGary An, R Chase Cockrell
Critical Care Medicine|April 2, 2008
Abdominal compartment syndrome: a concise clinical reviewGary An, Michael A West
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