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Biophysical Journal|July 10, 2007
Cysteine-cysteine contact preference leads to target-focusing in protein foldingMihaela E Sardiu, Margaret S Cheung, Yi-Kuo YuPlos Computational Biology|July 27, 2010
The construction and use of log-odds substitution scores for multiple sequence alignmentStephen F Altschul, John C Wootton, Elena Zaslavsky, et al.Bioinformatics (Oxford, England)|July 1, 2008
The effectiveness of position- and composition-specific gap costs for protein similarity searchesAleksandar Stojmirović, E Michael Gertz, Stephen F Altschul, et al.Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics|June 13, 2009
Rigorous treatment of electrostatics for spatially varying dielectrics based on energy minimizationO I Obolensky, T P Doerr, R Ray, et al.Rapid Communications in Mass Spectrometry : RCM|March 8, 2012
Using dissociation energies to predict observability of b- and y-peaks in mass spectra of short peptidesO I Obolensky, Wells W Wu, Rong-Fong Shen, et al.Journal of Proteome Research|May 10, 2024
Systematic Assessment of Deep Learning-Based Predictors of Fragmentation Intensity ProfilesMehdi B Hamaneh, Aleksey Y Ogurtsov, Oleg I Obolensky, et al.Rapid Communications in Mass Spectrometry : RCM|December 15, 2012
Using dissociation energies to predict observability of b- and y-peaks in mass spectra of short peptides. II. Results for hexapeptides with non-polar side chainsO I Obolensky, Wells W Wu, Rong-Fong Shen, et al.Europhysics Letters|October 22, 2019
Can dielectric spheres accurately model atomic-scale interactions?O I Obolensky, T P Doerr, A Y Ogurtsov, et al.Bioinformatics (Oxford, England)|October 9, 2014
Log-odds sequence logosYi-Kuo Yu, John A Capra, Aleksandar Stojmirović, et al.Physical Review Letters|November 17, 2018
Thermal Expansion of Single-Crystal H_{2}O and D_{2}O Ice IhDavid T W Buckingham, J J Neumeier, Sueli H Masunaga, et al.Pageof 9