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Nature Methods|August 11, 2022
Residue-wise local quality estimation for protein models from cryo-EM mapsGenki Terashi, Xiao Wang, Sai Raghavendra Maddhuri Venkata Subramaniya, et al.International Journal of Biological Macromolecules|February 28, 2026
Ferritin iron uptake and oxidation are dynamically modulated by nucleotide phosphate architecture via electrostatic gatingAnitha Rajendran, Sean Henley, Brent Nannenga, et al.Nature Communications|April 17, 2021
Detecting protein and DNA/RNA structures in cryo-EM maps of intermediate resolution using deep learningXiao Wang, Eman Alnabati, Tunde W Aderinwale, et al.Annual Review of Food Science and Technology|January 9, 2023
Bioinformatic Approaches for Characterizing Molecular Structure and Function of Food ProteinsHarrison Helmick, Anika Jain, Genki Terashi, et al.Plos Computational Biology|January 13, 2018
Modeling the assembly order of multimeric heteroprotein complexesLenna X Peterson, Yoichiro Togawa, Juan Esquivel-Rodriguez, et al.Proteins|November 8, 2019
Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38-46Charles Christoffer, Genki Terashi, Woong-Hee Shin, et al.Nano Letters|October 23, 2025
Structural Insights and Functional Dynamics of β-Lactoglobulin FibrilsRebecca Sternke-Hoffmann, David Rhyner, Genki Terashi, et al.Plos One|October 27, 2015
CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact AreaGenki Terashi, Mayuko Takeda-ShitakaProteins|September 23, 2016
Human and server docking prediction for CAPRI round 30-35 using LZerD with combined scoring functionsLenna X Peterson, Hyungrae Kim, Juan Esquivel-Rodriguez, et al.Proteins|August 2, 2025
Structure Modeling Protocols for Protein Multimer and RNA in CASP16 With Enhanced MSAs, Model Ranking, and Deep LearningYuki Kagaya, Tsukasa Nakamura, Jacob Verburgt, et al.Pageof 27