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Protein Science : a Publication of the Protein Society|April 27, 2026
Multivalent recognition of ferritin by full-length NCOA4 enables robust ferritinophagyAyush K Srivastava, Genki Terashi, Rosa Viner, et al.Biorxiv : the Preprint Server for Biology|February 27, 2026
Accurate Macromolecular Complex Modeling for Cryo-EM with CryoZetaZicong Zhang, Shu Li, Farhanaz Farheen, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 19, 2012
LB3D: a protein three-dimensional substructure search program based on the lower bound of a root mean square deviation valueGenki Terashi, Tetsuo Shibuya, Mayuko Takeda-ShitakaHuman Molecular Genetics|January 31, 2021
Genotype & phenotype in Lowe Syndrome: specific OCRL1 patient mutations differentially impact cellular phenotypesSwetha Ramadesikan, Lisette Skiba, Jennifer Lee, et al.Protein Science : a Publication of the Protein Society|July 1, 2005
The effect of long-range interactions on the secondary structure formation of proteinsDaisuke KiharaChemical & Pharmaceutical Bulletin|August 5, 2014
Quality assessment methods for 3D protein structure models based on a residue-residue distance matrix predictionGenki Terashi, Yuuki Nakamura, Hiromitsu Shimoyama, et al.Proteins|March 17, 2025
Integrative Protein Assembly With LZerD and Deep Learning in CAPRI 47-55Charles Christoffer, Yuki Kagaya, Jacob Verburgt, et al.BMC Bioinformatics|December 22, 2010
Improved protein surface comparison and application to low-resolution protein structure dataLee Sael, Daisuke KiharaJournal of Molecular Biology|November 26, 2003
The PDB is a covering set of small protein structuresDaisuke Kihara, Jeffrey SkolnickScientific Reports|December 1, 2019
NNTox: Gene Ontology-Based Protein Toxicity Prediction Using Neural NetworkAashish Jain, Daisuke KiharaPageof 27