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BMC Proceedings|November 24, 2012
Effect of conformation sampling strategies in genetic algorithm for multiple protein dockingJuan Esquivel-Rodríguez, Daisuke KiharaThe Journal of Physical Chemistry. B|March 16, 2012
Fitting multimeric protein complexes into electron microscopy maps using 3D Zernike descriptorsJuan Esquivel-Rodríguez, Daisuke KiharaBiorxiv : the Preprint Server for Biology|March 11, 2024
PL-PatchSurfer3: Improved Structure-Based Virtual Screening for Structure Variation Using 3D Zernike DescriptorsWoong-Hee Shin, Daisuke KiharaBioinformatics (Oxford, England)|May 7, 2016
Genome-scale prediction of moonlighting proteins using diverse protein association informationIshita K Khan, Daisuke KiharaJournal of Computer-Aided Molecular Design|September 12, 2019
Predicting binding poses and affinity ranking in D3R Grand Challenge using PL-PatchSurfer2.0Woong-Hee Shin, Daisuke KiharaMethods in Molecular Biology (Clifton, N.J.)|March 30, 2018
Virtual Ligand Screening Using PL-PatchSurfer2, a Molecular Surface-Based Protein-Ligand Docking MethodWoong-Hee Shin, Daisuke KiharaBiochemical Society Transactions|November 18, 2014
Computational characterization of moonlighting proteinsIshita K Khan, Daisuke KiharaJournal of Structural Biology|June 26, 2013
Computational methods for constructing protein structure models from 3D electron microscopy mapsJuan Esquivel-Rodríguez, Daisuke KiharaMethods in Molecular Biology (Clifton, N.J.)|April 5, 2019
55 Years of the Rossmann FoldWoong-Hee Shin, Daisuke KiharaMatter|July 25, 2022
CryoFold: determining protein structures and data-guided ensembles from cryo-EM density mapsMrinal Shekhar, Genki Terashi, Chitrak Gupta, et al.Pageof 27