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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 19, 2012
LB3D: a protein three-dimensional substructure search program based on the lower bound of a root mean square deviation valueGenki Terashi, Tetsuo Shibuya, Mayuko Takeda-Shitaka
Plos One|October 27, 2015
CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact AreaGenki Terashi, Mayuko Takeda-Shitaka
Chemical & Pharmaceutical Bulletin|August 5, 2014
Quality assessment methods for 3D protein structure models based on a residue-residue distance matrix predictionGenki Terashi, Yuuki Nakamura, Hiromitsu Shimoyama, et al.
Chemical & Pharmaceutical Bulletin|October 5, 2019
Geometrical Conversion of the EGFR Extracellular Domain by Adiabatic Mapping Combining Normal Mode Analysis of the Elastic Network Model and Energy OptimizationHiroyuki Nojima, Yasuomi Kiyota, Genki Terashi, et al.
Proteins|June 28, 2005
Searching for protein-protein interaction sites and docking by the methods of molecular dynamics, grid scoring, and the pairwise interaction potential of amino acid residuesGenki Terashi, Mayuko Takeda-Shitaka, Daisuke Takaya, et al.
Chemical & Pharmaceutical Bulletin|November 6, 2012
United3D: a protein model quality assessment program that uses two consensus based methodsGenki Terashi, Makoto Oosawa, Yuuki Nakamura, et al.
Medicinal Chemistry (Shariqah (United Arab Emirates))|June 22, 2006
FAMS complex: a fully automated homology modeling system for protein complex structuresMayuko Takeda-Shitaka, Genki Terashi, Chieko Chiba, et al.
Chemical & Pharmaceutical Bulletin|January 5, 2010
Method for predicting homology modeling accuracy from amino acid sequence alignment: the power functionMitsuo Iwadate, Kazuhiko Kanou, Genki Terashi, et al.
Chemical & Pharmaceutical Bulletin|February 2, 2010
New protein structure model evaluation methods that include a side-chain consensus score for the protein modelingKazuhiko Kanou, Tomoko Hirata, Genki Terashi, et al.
Chemical & Pharmaceutical Bulletin|December 3, 2009
FAMSD: A powerful protein modeling platform that combines alignment methods, homology modeling, 3D structure quality estimation and molecular dynamicsKazuhiko Kanou, Mitsuo Iwadate, Tomoko Hirata, et al.
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