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Nature Communications|August 25, 2023
Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjectionNelson Johansen, Hongru Hu, Gerald Quon
BMC Genomics|April 28, 2012
Enhancer identification in mouse embryonic stem cells using integrative modeling of chromatin and genomic featuresChih-yu Chen, Quaid Morris, Jennifer A Mitchell
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|February 13, 2009
Post-transcriptional gene regulation: RNA-protein interactions, RNA processing, mRNA stability and localizationBenjamin Blencowe, Steven Brenner, Timothy Hughes, et al.
Genome Biology|March 30, 2018
QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq dataKevin C H Ha, Benjamin J Blencowe, Quaid Morris
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|December 17, 2011
Mixture model for sub-phenotyping in GWASDavid Warde-Farley, Michael Brudno, Quaid Morris, et al.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|December 5, 2019
TrackSigFreq: subclonal reconstructions based on mutation signatures and allele frequenciesCaitlin F Harrigan, Yulia Rubanova, Quaid Morris, et al.
Nucleic Acids Research|January 11, 2013
Patterns of methylation heritability in a genome-wide analysis of four brain regionsGerald Quon, Christoph Lippert, David Heckerman, et al.
Current Opinion in Microbiology|November 24, 2004
Transcriptional networks: reverse-engineering gene regulation on a global scaleGordon Chua, Mark D Robinson, Quaid Morris, et al.
Biorxiv : the Preprint Server for Biology|June 12, 2025
Damage and Misrepair Signatures: Compact Representations of Pan-cancer Mutational ProcessesCaitlin F Harrigan, Kieran R Campbell, Quaid Morris, et al.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|December 5, 2019
Genome Gerrymandering: optimal division of the genome into regions with cancer type specific differences in mutation ratesAdamo Young, Jacob Chmura, Yoonsik Park, et al.
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