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Methods in Molecular Biology (Clifton, N.J.)|May 4, 2022
Dissecting the Genome for Drug Response PredictionGerardo Pepe, Chiara Carrino, Luca Parca, et al.Computational and Structural Biotechnology Journal|October 16, 2023
Exploring the landscape of tools and resources for the analysis of long non-coding RNAsMonica Ballarino, Gerardo Pepe, Manuela Helmer-Citterich, et al.Data in Brief|January 6, 2023
MADIA - Meteorological variables for agriculture: A dataset for the Italian areaBarbara Parisse, Roberta Alilla, Antonio Gerardo Pepe, et al.Plant Foods for Human Nutrition (Dordrecht, Netherlands)|May 31, 2023
Looking for Plant microRNAs in Human Blood Samples: Bioinformatics Evidence and PerspectivesLorenzo Olmi, Gerardo Pepe, Manuela Helmer-Citterich, et al.Non-Coding RNA Research|April 7, 2022
Variation in the co-expression profile highlights a loss of miRNA-mRNA regulation in multiple cancer typesGerardo Pepe, Luca Parca, Lorenzo Viviani, et al.International Journal of Molecular Sciences|April 27, 2024
A Meta-Analysis Approach to Gene Regulatory Network Inference Identifies Key Regulators of Cardiovascular DiseasesGerardo Pepe, Romina Appierdo, Gabriele Ausiello, et al.Data in Brief|February 19, 2025
Dataset on Weather-related Disasters in Agriculture (WDA) in Italy 2005-2021Antonella Pontrandolfi, Roberta Alilla, Flora De Natale, et al.Non-Coding RNA Research|July 23, 2024
Human lncRNAs harbor conserved modules embedded in different sequence contextsFrancesco Ballesio, Gerardo Pepe, Gabriele Ausiello, et al.Biorxiv : the Preprint Server for Biology|September 26, 2025
The Integrated Cellular and Molecular Landscape of AutoimmunityRomina Appierdo, Gerardo Pepe, Manuela Helmer-Citterich, et al.Journal of Molecular Medicine (Berlin, Germany)|October 14, 2025
Transcriptome profiling of human dermal MDPL fibroblasts reveals a characteristic molecular signature providing insights into pathogenic mechanismsMichela Murdocca, Gerardo Pepe, Serena Maccaroni, et al.Pageof 3