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The Journal of Chemical Physics|September 9, 2018
Advances in milestoning. II. Calculating time-correlation functions from milestoning using stochastic path integralsGianmarc Grazioli, Ioan AndricioaeiThe Journal of Chemical Physics|September 9, 2018
Advances in milestoning. I. Enhanced sampling via wind-assisted reweighted milestoning (WARM)Gianmarc Grazioli, Ioan AndricioaeiThe Journal of Chemical Physics|August 3, 2015
Rate turnover in mechano-catalytic coupling: A model and its microscopic originMahua Roy, Gianmarc Grazioli, Ioan AndricioaeiThe Journal of Chemical Physics|October 23, 2017
Automated placement of interfaces in conformational kinetics calculations using machine learningGianmarc Grazioli, Carter T Butts, Ioan AndricioaeiNature Structural & Molecular Biology|August 2, 2016
m(1)A and m(1)G disrupt A-RNA structure through the intrinsic instability of Hoogsteen base pairsHuiqing Zhou, Isaac J Kimsey, Evgenia N Nikolova, et al.The Journal of Membrane Biology|December 15, 2010
A comparative study on the ability of two implicit solvent lipid models to predict transmembrane helix tilt anglesAaron Frank, Ioan AndricioaeiJournal of Molecular Biology|June 28, 2005
Repetitive pulling catalyzes co-translocational unfolding of barnase during import through a mitochondrial porePu Tian, Ioan AndricioaeiBiophysical Journal|August 5, 2010
Free energy calculations reveal rotating-ratchet mechanism for DNA supercoil relaxation by topoisomerase IB and its inhibitionJeff Wereszczynski, Ioan AndricioaeiThe Journal of Chemical Physics|October 19, 2005
A skewed-momenta method to efficiently generate conformational-transition trajectoriesJames MacFadyen, Ioan AndricioaeiProceedings of the National Academy of Sciences of the United States of America|October 25, 2006
On structural transitions, thermodynamic equilibrium, and the phase diagram of DNA and RNA duplexes under torque and tensionJeff Wereszczynski, Ioan AndricioaeiPageof 8