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Cell Reports|October 26, 2018
Pan-Cancer Landscape of Aberrant DNA Methylation across Human TumorsSadegh Saghafinia, Marco Mina, Nicolo Riggi, et al.Nature Genetics|September 29, 2020
Discovering functional evolutionary dependencies in human cancersMarco Mina, Arvind Iyer, Daniele Tavernari, et al.Methods in Molecular Biology (Clifton, N.J.)|March 11, 2018
Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data AnalysisDarren K Patten, Giacomo Corleone, Luca MagnaniPlos One|June 22, 2012
AlignNemo: a local network alignment method to integrate homology and topologyGiovanni Ciriello, Marco Mina, Pietro H Guzzi, et al.Nature Communications|April 26, 2026
HaploC-tools reveal haplotype-specific chromosome conformation and chromatin statesYuanlong Liu, Gian Marco Franceschini, Yueyun Zhang, et al.Current Protocols in Bioinformatics|March 19, 2013
Using MEMo to discover mutual exclusivity modules in cancerGiovanni Ciriello, Ethan Cerami, Bulent Arman Aksoy, et al.Molecular Reproduction and Development|June 19, 2009
Differential remodeling of mono- and trimethylated H3K27 during porcine embryo developmentKi-Eun Park, Luca Magnani, Ryan A CabotNature Genetics|December 8, 2023
CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticityMarco Varrone, Daniele Tavernari, Albert Santamaria-Martínez, et al.Nature Genetics|July 10, 2026
Evolving patterns of co-mutations from tumor initiation to metastatic progressionArvind Iyer, Miljan Petrovic, Debora Sesia, et al.Epigenomics|December 19, 2012
Chromatin landscape and endocrine response in breast cancerLuca Magnani, Mylène Brunelle, Nicolas Gévry, et al.Pageof 20