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Iscience
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August 28, 2020
Latent Factor Modeling of scRNA-Seq Data Uncovers Dysregulated Pathways in Autoimmune Disease Patients
Giovanni Palla, Enrico Ferrero
Nature Biotechnology
|
February 8, 2022
Spatial components of molecular tissue biology
Giovanni Palla, David S Fischer, Aviv Regev, et al.
Bioinformatics (Oxford, England)
|
June 28, 2024
GraphCompass: spatial metrics for differential analyses of cell organization across conditions
Mayar Ali, Merel Kuijs, Soroor Hediyeh-Zadeh, et al.
RMD Open
|
July 19, 2018
Increased B-cell activating factor (BAFF)/B-lymphocyte stimulator (BLyS) in primary antiphospholipid syndrome is associated with higher adjusted global antiphospholipid syndrome scores
Lucas L van den Hoogen, Giovanni Palla, Cornelis P J Bekker, et al.
Cell Reports
|
December 5, 2019
Quantification of Differential Transcription Factor Activity and Multiomics-Based Classification into Activators and Repressors: diffTF
Ivan Berest, Christian Arnold, Armando Reyes-Palomares, et al.
Nature Methods
|
October 31, 2025
Nicheformer: a foundation model for single-cell and spatial omics
Alejandro Tejada-Lapuerta, Anna C Schaar, Robert Gutgesell, et al.
Science (New York, N.Y.)
|
May 7, 2026
TranscriptFormer: A generative cell atlas across 1.5 billion years of evolution
James D Pearce, Sara E Simmonds, Gita Mahmoudabadi, et al.
Cell Stem Cell
|
May 20, 2023
Multimodal characterization of murine gastruloid development
Simon Suppinger, Marietta Zinner, Nadim Aizarani, et al.
Nature Methods
|
February 1, 2022
Squidpy: a scalable framework for spatial omics analysis
Giovanni Palla, Hannah Spitzer, Michal Klein, et al.
Molecular Systems Biology
|
April 19, 2023
GRaNIE and GRaNPA: inference and evaluation of enhancer-mediated gene regulatory networks
Aryan Kamal, Christian Arnold, Annique Claringbould, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 17) with videos related to
Sort By:
Page
of 2
Iscience
|
August 28, 2020
Latent Factor Modeling of scRNA-Seq Data Uncovers Dysregulated Pathways in Autoimmune Disease Patients
Giovanni Palla, Enrico Ferrero
Nature Biotechnology
|
February 8, 2022
Spatial components of molecular tissue biology
Giovanni Palla, David S Fischer, Aviv Regev, et al.
Bioinformatics (Oxford, England)
|
June 28, 2024
GraphCompass: spatial metrics for differential analyses of cell organization across conditions
Mayar Ali, Merel Kuijs, Soroor Hediyeh-Zadeh, et al.
RMD Open
|
July 19, 2018
Increased B-cell activating factor (BAFF)/B-lymphocyte stimulator (BLyS) in primary antiphospholipid syndrome is associated with higher adjusted global antiphospholipid syndrome scores
Lucas L van den Hoogen, Giovanni Palla, Cornelis P J Bekker, et al.
Cell Reports
|
December 5, 2019
Quantification of Differential Transcription Factor Activity and Multiomics-Based Classification into Activators and Repressors: diffTF
Ivan Berest, Christian Arnold, Armando Reyes-Palomares, et al.
Nature Methods
|
October 31, 2025
Nicheformer: a foundation model for single-cell and spatial omics
Alejandro Tejada-Lapuerta, Anna C Schaar, Robert Gutgesell, et al.
Science (New York, N.Y.)
|
May 7, 2026
TranscriptFormer: A generative cell atlas across 1.5 billion years of evolution
James D Pearce, Sara E Simmonds, Gita Mahmoudabadi, et al.
Cell Stem Cell
|
May 20, 2023
Multimodal characterization of murine gastruloid development
Simon Suppinger, Marietta Zinner, Nadim Aizarani, et al.
Nature Methods
|
February 1, 2022
Squidpy: a scalable framework for spatial omics analysis
Giovanni Palla, Hannah Spitzer, Michal Klein, et al.
Molecular Systems Biology
|
April 19, 2023
GRaNIE and GRaNPA: inference and evaluation of enhancer-mediated gene regulatory networks
Aryan Kamal, Christian Arnold, Annique Claringbould, et al.
Page
of 2