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Bioinformatics (Oxford, England)|July 7, 2026
Optimizing sparse and skew hashing: faster k-mer dictionariesGiulio Ermanno Pibiri, Rob PatroBiorxiv : the Preprint Server for Biology|February 6, 2026
Optimizing sparse and skew hashing: faster k -mer dictionariesGiulio Ermanno Pibiri, Rob PatroBiorxiv : the Preprint Server for Biology|August 7, 2023
Meta-colored compacted de Bruijn graphsGiulio Ermanno Pibiri, Jason Fan, Rob PatroJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 9, 2024
Where the Patterns Are: Repetition-Aware Compression for Colored de Bruijn GraphsAlessio Campanelli, Giulio Ermanno Pibiri, Jason Fan, et al.Biorxiv : the Preprint Server for Biology|July 19, 2024
Where the patterns are: repetition-aware compression for colored de Bruijn graphs ⋆Alessio Campanelli, Giulio Ermanno Pibiri, Jason Fan, et al.Biorxiv : the Preprint Server for Biology|May 22, 2023
Fulgor: A fast and compact k-mer index for large-scale matching and color queriesJason Fan, Noor Pratap Singh, Jamshed Khan, et al.Algorithms for Molecular Biology : AMB|January 23, 2024
Fulgor: a fast and compact k-mer index for large-scale matching and color queriesJason Fan, Jamshed Khan, Noor Pratap Singh, et al.Biorxiv : the Preprint Server for Biology|June 6, 2025
Kaminari: a resource-frugal index for approximate colored k -mer queriesVictor Levallois, Yoshihiro Shibuya, Bertrand Le Gal, et al.Bioinformatics (Oxford, England)|June 27, 2022
Sparse and skew hashing of K-mersGiulio Ermanno PibiriAlgorithms for Molecular Biology : AMB|June 16, 2023
On weighted k-mer dictionariesGiulio Ermanno PibiriPageof 9