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Elife
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March 1, 2022
Robust and annotation-free analysis of alternative splicing across diverse cell types in mice
Gonzalo Benegas, Jonathan Fischer, Yun S Song
Biorxiv : the Preprint Server for Biology
|
February 24, 2025
Benchmarking DNA Sequence Models for Causal Regulatory Variant Prediction in Human Genetics
Gonzalo Benegas, Gökcen Eraslan, Yun S Song
Proceedings of the National Academy of Sciences of the United States of America
|
October 26, 2023
DNA language models are powerful predictors of genome-wide variant effects
Gonzalo Benegas, Sanjit Singh Batra, Yun S Song
Arxiv
|
March 17, 2025
A Phylogenetic Approach to Genomic Language Modeling
Carlos Albors, Jianan Canal Li, Gonzalo Benegas, et al.
Biorxiv : the Preprint Server for Biology
|
October 24, 2023
GPN-MSA: an alignment-based DNA language model for genome-wide variant effect prediction
Gonzalo Benegas, Carlos Albors, Alan J Aw, et al.
Arxiv
|
July 29, 2024
Genomic Language Models: Opportunities and Challenges
Gonzalo Benegas, Chengzhong Ye, Carlos Albors, et al.
Nature Biotechnology
|
January 3, 2025
A DNA language model based on multispecies alignment predicts the effects of genome-wide variants
Gonzalo Benegas, Carlos Albors, Alan J Aw, et al.
Trends in Genetics : TIG
|
January 3, 2025
Genomic language models: opportunities and challenges
Gonzalo Benegas, Chengzhong Ye, Carlos Albors, et al.
Biorxiv : the Preprint Server for Biology
|
March 3, 2023
choros: correction of sequence-based biases for accurate quantification of ribosome profiling data
Amanda Mok, Robert Tunney, Gonzalo Benegas, et al.
Biorxiv : the Preprint Server for Biology
|
September 26, 2025
Predicting functional constraints across evolutionary timescales with phylogeny-informed genomic language models
Chengzhong Ye, Gonzalo Benegas, Carlos Albors, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Elife
|
March 1, 2022
Robust and annotation-free analysis of alternative splicing across diverse cell types in mice
Gonzalo Benegas, Jonathan Fischer, Yun S Song
Biorxiv : the Preprint Server for Biology
|
February 24, 2025
Benchmarking DNA Sequence Models for Causal Regulatory Variant Prediction in Human Genetics
Gonzalo Benegas, Gökcen Eraslan, Yun S Song
Proceedings of the National Academy of Sciences of the United States of America
|
October 26, 2023
DNA language models are powerful predictors of genome-wide variant effects
Gonzalo Benegas, Sanjit Singh Batra, Yun S Song
Arxiv
|
March 17, 2025
A Phylogenetic Approach to Genomic Language Modeling
Carlos Albors, Jianan Canal Li, Gonzalo Benegas, et al.
Biorxiv : the Preprint Server for Biology
|
October 24, 2023
GPN-MSA: an alignment-based DNA language model for genome-wide variant effect prediction
Gonzalo Benegas, Carlos Albors, Alan J Aw, et al.
Arxiv
|
July 29, 2024
Genomic Language Models: Opportunities and Challenges
Gonzalo Benegas, Chengzhong Ye, Carlos Albors, et al.
Nature Biotechnology
|
January 3, 2025
A DNA language model based on multispecies alignment predicts the effects of genome-wide variants
Gonzalo Benegas, Carlos Albors, Alan J Aw, et al.
Trends in Genetics : TIG
|
January 3, 2025
Genomic language models: opportunities and challenges
Gonzalo Benegas, Chengzhong Ye, Carlos Albors, et al.
Biorxiv : the Preprint Server for Biology
|
March 3, 2023
choros: correction of sequence-based biases for accurate quantification of ribosome profiling data
Amanda Mok, Robert Tunney, Gonzalo Benegas, et al.
Biorxiv : the Preprint Server for Biology
|
September 26, 2025
Predicting functional constraints across evolutionary timescales with phylogeny-informed genomic language models
Chengzhong Ye, Gonzalo Benegas, Carlos Albors, et al.
Page
of 2