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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 26, 2004
Fast and simple character classes and bounded gaps pattern matching, with applications to protein searchingGonzalo Navarro, Mathieu Raffinot
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 11, 2013
On the identification of conflicting contiguities in ancestral genome reconstructionAïda Ouangraoua, Mathieu Raffinot
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|March 22, 2014
Easy identification of generalized common and conserved nested intervalsFabien de Montgolfier, Mathieu Raffinot, Irena Rusu
Proceedings. IEEE Computer Society Bioinformatics Conference|April 20, 2005
High similarity sequence comparison in clustering large sequence databasesLorie Dudoignon, Eric Glemet, Hendrik Cornelis Heus, et al.
Computational Biology and Chemistry|June 12, 2003
Gene teams: a new formalization of gene clusters for comparative genomicsNicolas Luc, Jean-Loup Risler, Anne Bergeron, et al.
Journal of Bioinformatics and Computational Biology|April 27, 2005
Approximate matching of structured motifs in DNA sequencesNadia El-Mabrouk, Mathieu Raffinot, Jean-Eudes Duchesne, et al.
Genome Research|May 19, 2005
Identification of genomic features using microsyntenies of domains: domain teamsSophie Pasek, Anne Bergeron, Jean-Loup Risler, et al.
IEEE Transactions on Pattern Analysis and Machine Intelligence|July 12, 2008
Effective proximity retrieval by ordering permutationsEdgar Chavez, Karina Figueroa, Gonzalo Navarro
International Symposium on String Processing and Information Retrieval : SPIRE ... : Proceedings. SPIRE (Symposium)|December 15, 2025
A simple grammar-based index for finding approximately longest common substringsTravis Gagie, Sana Kashgouli, Gonzalo Navarro
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 10, 2010
Storage and retrieval of highly repetitive sequence collectionsVeli Mäkinen, Gonzalo Navarro, Jouni Sirén, et al.
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