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Bioinformatics (Oxford, England)|July 29, 2025
Deep generative model of RNAs based on variational autoencoder with context-free grammarGoro Terai, Kiyoshi Asai
Nucleic Acids Research|April 7, 2022
QRNAstruct: a method for extracting secondary structural features of RNA via regression with biological activityGoro Terai, Kiyoshi Asai
Nucleic Acids Research|June 7, 2020
Improving the prediction accuracy of protein abundance in Escherichia coli using mRNA accessibilityGoro Terai, Kiyoshi Asai
Bioinformatics (Oxford, England)|November 22, 2015
CDSfold: an algorithm for designing a protein-coding sequence with the most stable secondary structureGoro Terai, Satoshi Kamegai, Kiyoshi Asai
NAR Genomics and Bioinformatics|December 10, 2025
A method for estimating energy parameters of RNAs by differentiating base-pairing probabilitiesKazuteru Yamamura, Goro Terai, Kiyoshi Asai
Bioinformatics (Oxford, England)|January 29, 2017
Evolutionary design of multiple genes encoding the same proteinGoro Terai, Satoshi Kamegai, Akito Taneda, et al.
Plos One|September 8, 2012
Prediction of conserved precursors of miRNAs and their mature forms by integrating position-specific structural featuresGoro Terai, Hiroaki Okida, Kiyoshi Asai, et al.
RNA (New York, N.Y.)|October 26, 2007
miRRim: a novel system to find conserved miRNAs with high sensitivity and specificityGoro Terai, Takashi Komori, Kiyoshi Asai, et al.
Plos Computational Biology|November 20, 2025
PseudoknotVisualizer: Visualization of pseudoknots on three-dimensional RNA structuresTakumi Otagaki, Goro Terai, Kiyoshi Asai, et al.
Bioinformatics (Oxford, England)|July 14, 2020
Finding the direct optimal RNA barrier energy and improving pathways with an arbitrary energy modelHiroki Takizawa, Junichi Iwakiri, Goro Terai, et al.
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