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Plos Computational Biology|December 19, 2013
Amino acid changes in disease-associated variants differ radically from variants observed in the 1000 genomes project datasetTjaart A P de Beer, Roman A Laskowski, Sarah L Parks, et al.
Proceedings of the National Academy of Sciences of the United States of America|September 14, 2018
TRIM21 mediates antibody inhibition of adenovirus-based gene delivery and vaccinationMaria Bottermann, Stian Foss, Laurens M van Tienen, et al.
Nucleic Acids Research|January 29, 2016
ALVIS: interactive non-aggregative visualization and explorative analysis of multiple sequence alignmentsRoland F Schwarz, Asif U Tamuri, Marek Kultys, et al.
Biorxiv : the Preprint Server for Biology|April 6, 2021
A daily-updated database and tools for comprehensive SARS-CoV-2 mutation-annotated treesJakob McBroome, Bryan Thornlow, Angie S Hinrichs, et al.
Nature Communications|February 10, 2019
A conserved molecular switch in Class F receptors regulates receptor activation and pathway selectionShane C Wright, Paweł Kozielewicz, Maria Kowalski-Jahn, et al.
RNA (New York, N.Y.)|March 2, 2011
RNAcode: robust discrimination of coding and noncoding regions in comparative sequence dataStefan Washietl, Sven Findeiss, Stephan A Müller, et al.
BMC Bioinformatics|October 5, 2006
XRate: a fast prototyping, training and annotation tool for phylo-grammarsPeter S Klosterman, Andrew V Uzilov, Yuri R Bendaña, et al.
Molecular Biology and Evolution|September 1, 2021
A Daily-Updated Database and Tools for Comprehensive SARS-CoV-2 Mutation-Annotated TreesJakob McBroome, Bryan Thornlow, Angie S Hinrichs, et al.
BMC Bioinformatics|May 29, 2021
A phylogenetic approach for weighting genetic sequencesNicola De Maio, Alexander V Alekseyenko, William J Coleman-Smith, et al.
Nature Methods|February 9, 2026
Rate variation and recurrent sequence errors in pandemic-scale phylogeneticsNicola De Maio, Myrthe Willemsen, Samuel Martin, et al.
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