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Journal of Integrative Bioinformatics|June 24, 2014
Classification of breast cancer subtypes by combining gene expression and DNA methylation dataMarkus List, Anne-Christin Hauschild, Qihua Tan, et al.
BMC Bioinformatics|October 1, 2018
Optimizing PCR primers targeting the bacterial 16S ribosomal RNA geneFrancesco Sambo, Francesca Finotello, Enrico Lavezzo, et al.
Nature Methods|August 9, 2024
Guiding questions to avoid data leakage in biological machine learning applicationsJudith Bernett, David B Blumenthal, Dominik G Grimm, et al.
NPJ Systems Biology and Applications|June 27, 2017
On the performance of de novo pathway enrichmentRicha Batra, Nicolas Alcaraz, Kevin Gitzhofer, et al.
Nucleic Acids Research|September 25, 2020
DIGGER: exploring the functional role of alternative splicing in protein interactionsZakaria Louadi, Kevin Yuan, Alexander Gress, et al.
Trends in Pharmacological Sciences|December 13, 2021
Network pharmacology: curing causal mechanisms instead of treating symptomsCristian Nogales, Zeinab M Mamdouh, Markus List, et al.
Microbial Genomics|February 29, 2024
On the limits of 16S rRNA gene-based metagenome prediction and functional profilingMonica Steffi Matchado, Malte Rühlemann, Sandra Reitmeier, et al.
Briefings in Bioinformatics|September 6, 2023
Multi-omics regulatory network inference in the presence of missing dataJuan D Henao, Michael Lauber, Manuel Azevedo, et al.
Bioinformatics (Oxford, England)|December 29, 2022
Systematic analysis of alternative splicing in time course data using SpyconeChit Tong Lio, Gordon Grabert, Zakaria Louadi, et al.
Bioinformatics (Oxford, England)|December 28, 2020
BiCoN: network-constrained biclustering of patients and omics dataOlga Lazareva, Stefan Canzar, Kevin Yuan, et al.
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