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Methods in Molecular Biology (Clifton, N.J.)|October 5, 2019
De Novo Pathway Enrichment with KeyPathwayMinerNicolas Alcaraz, Anne Hartebrodt, Markus ListMethods in Molecular Biology (Clifton, N.J.)|October 5, 2019
De Novo Pathway-Based Classification of Breast Cancer SubtypesMarkus List, Nicolas Alcaraz, Richa BatraBioinformatics (Oxford, England)|November 23, 2019
NeoFuse: predicting fusion neoantigens from RNA sequencing dataGeorgios Fotakis, Dietmar Rieder, Marlene Haider, et al.Nucleic Acids Research|May 2, 2017
Interactive microbial distribution analysis using BioAtlasJesper Beltoft Lund, Markus List, Jan BaumbachBriefings in Bioinformatics|March 6, 2024
Cracking the black box of deep sequence-based protein-protein interaction predictionJudith Bernett, David B Blumenthal, Markus ListInternational Journal of Cancer|October 30, 2021
NKG2A is a late immune checkpoint on CD8 T cells and marks repeated stimulation and cell divisionLinda Borst, Marjolein Sluijter, Gregor Sturm, et al.Nucleic Acids Research|April 17, 2016
DeepBlue epigenomic data server: programmatic data retrieval and analysis of epigenome region setsFelipe Albrecht, Markus List, Christoph Bock, et al.Frontiers in Genetics|February 17, 2022
KeyPathwayMineR: <i>De Novo</i> Pathway Enrichment in the R EcosystemKonstantinos Mechteridis, Michael Lauber, Jan Baumbach, et al.Bioinformatics (Oxford, England)|March 24, 2017
DeepBlueR: large-scale epigenomic analysis in RFelipe Albrecht, Markus List, Christoph Bock, et al.Bioinformatics (Oxford, England)|June 22, 2017
TIminer: NGS data mining pipeline for cancer immunology and immunotherapyElias Tappeiner, Francesca Finotello, Pornpimol Charoentong, et al.Pageof 21