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Journal of Molecular Biology|April 5, 2012
Structure-based identification of new high-affinity nucleosome binding sequencesFederica Battistini, Christopher A Hunter, Irene K Moore, et al.Nature Structural & Molecular Biology|August 25, 2009
Dynamics and function of compact nucleosome arraysMichael G Poirier, Eugene Oh, Hannah S Tims, et al.Methods in Enzymology|August 30, 2012
A chemical approach to mapping nucleosomes at base pair resolution in yeastKristin R Brogaard, Liqun Xi, Ji-Ping Wang, et al.The Journal of Physical Chemistry. B|June 7, 2011
Modeling DNA-bending in the nucleosome: role of AA periodicityTatiana R Prytkova, Xiao Zhu, Jonathan Widom, et al.Genome Biology|December 2, 2010
Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodologyNoam Kaplan, Timothy R Hughes, Jason D Lieb, et al.Genome Research|August 19, 2010
p53 binds preferentially to genomic regions with high DNA-encoded nucleosome occupancyEfrat Lidor Nili, Yair Field, Yaniv Lubling, et al.Journal of the American Statistical Association|March 29, 2014
A locally convoluted cluster model for nucleosome positioning signals in chemical mapLiqun Xi, Kristin Brogaard, Qingyang Zhang, et al.Proceedings of the National Academy of Sciences of the United States of America|June 4, 2014
Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneityEliza C Small, Liqun Xi, Ji-Ping Wang, et al.BMC Bioinformatics|June 26, 2010
Predicting nucleosome positioning using a duration Hidden Markov ModelLiqun Xi, Yvonne Fondufe-Mittendorf, Lei Xia, et al.Plos One|May 21, 2015
Differential Nucleosome Occupancies across Oct4-Sox2 Binding Sites in Murine Embryonic Stem CellsAmy Sebeson, Liqun Xi, Quanwei Zhang, et al.Pageof 22