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Metabolic Engineering|January 31, 2023
Multi-dimensional experimental and computational exploration of metabolism pinpoints complex probiotic interactionsGuido Zampieri, Georgios Efthimiou, Claudio AngioneBioinformatics (Oxford, England)|May 11, 2021
Multimodal regularized linear models with flux balance analysis for mechanistic integration of omics dataGiuseppe Magazzù, Guido Zampieri, Claudio AngioneComputers in Biology and Medicine|November 7, 2022
Clinical stratification improves the diagnostic accuracy of small omics datasets within machine learning and genome-scale metabolic modelling methodsGiuseppe Magazzù, Guido Zampieri, Claudio AngionePlos Computational Biology|July 12, 2019
Machine and deep learning meet genome-scale metabolic modelingGuido Zampieri, Supreeta Vijayakumar, Elisabeth Yaneske, et al.Cell Reports Methods|February 23, 2023
Metatranscriptomics-guided genome-scale metabolic modeling of microbial communitiesGuido Zampieri, Stefano Campanaro, Claudio Angione, et al.Trends in Endocrinology and Metabolism: TEM|April 4, 2024
Emerging methods for genome-scale metabolic modeling of microbial communitiesChaimaa Tarzi, Guido Zampieri, Neil Sullivan, et al.Proceedings of the National Academy of Sciences of the United States of America|July 18, 2020
A mechanism-aware and multiomic machine-learning pipeline characterizes yeast cell growthChristopher Culley, Supreeta Vijayakumar, Guido Zampieri, et al.FEBS Letters|August 19, 2021
Genome-scale metabolic modelling of SARS-CoV-2 in cancer cells reveals an increased shift to glycolytic energy productionElisabeth Yaneske, Guido Zampieri, Loris Bertoldi, et al.Bioinformatics (Oxford, England)|September 9, 2021
Integrating genome-scale metabolic modelling and transfer learning for human gene regulatory network reconstructionGianvito Pio, Paolo Mignone, Giuseppe Magazzù, et al.Cell Systems|April 23, 2026
Fusing imaging and metabolic modeling via multimodal deep learning in ovarian cancerNoushin Eftekhari, Suraj Verma, Aninda Saha, et al.Pageof 10