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Biorxiv : the Preprint Server for Biology|July 14, 2025
Design of overlapping genes using deep generative models of protein sequencesGun Woo Byeon, Marc Expòsit, David Baker, et al.Cell Systems|June 5, 2025
Iterative deep learning design of human enhancers exploits condensed sequence grammar to achieve cell-type specificityChristopher Yin, Sebastian Castillo-Hair, Gun Woo Byeon, et al.Biorxiv : the Preprint Server for Biology|June 25, 2024
Iterative deep learning-design of human enhancers exploits condensed sequence grammar to achieve cell type-specificityChristopher Yin, Sebastian Castillo Hair, Gun Woo Byeon, et al.Cell Reports|January 20, 2021
VELCRO-IP RNA-seq reveals ribosome expansion segment function in translation genome-wideKathrin Leppek, Gun Woo Byeon, Kotaro Fujii, et al.Journal of the American Chemical Society|November 24, 2025
De Novo Design of Peptide Masks Enables Rapid Generation of Conditionally-Active Miniprotein BindersMontserrat Escobar-Rosales, Cristina Montaner, Marc Expòsit, et al.Nature Machine Intelligence|August 15, 2022
Interpreting Neural Networks for Biological Sequences by Learning Stochastic MasksJohannes Linder, Alyssa La Fleur, Zibo Chen, et al.Nature Chemical Biology|August 27, 2024
Massively parallel measurement of protein-protein interactions by sequencing using MP3-seqAlexandr Baryshev, Alyssa La Fleur, Benjamin Groves, et al.Biorxiv : the Preprint Server for Biology|February 17, 2023
Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimersAlexander Baryshev, Alyssa La Fleur, Benjamin Groves, et al.BMC Bioinformatics|October 21, 2021
Fast activation maximization for molecular sequence designJohannes Linder, Georg SeeligSoft Matter|March 29, 2020
Programmable patterns in a DNA-based reaction-diffusion systemSifang Chen, Georg SeeligPageof 130