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BMC Bioinformatics|September 15, 2007
PathFinder: mining signal transduction pathway segments from protein-protein interaction networksGurkan Bebek, Jiong YangMethods in Molecular Biology (Clifton, N.J.)|February 7, 2012
Identifying gene interaction networksGurkan BebekMethods in Molecular Biology (Clifton, N.J.)|October 6, 2017
Identifying Gene Interaction NetworksDanica Wiredja, Gurkan BebekJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|November 1, 2011
Vavien: an algorithm for prioritizing candidate disease genes based on topological similarity of proteins in interaction networksSinan Erten, Gurkan Bebek, Mehmet KoyutürkJournal of Clinical Bioinformatics|September 3, 2011
Microenvironmental genomic alterations reveal signaling networks for head and neck squamous cell carcinomaGurkan Bebek, Mohammed Orloff, Charis EngBMC Bioinformatics|December 15, 2010
PETALS: Proteomic Evaluation and Topological Analysis of a mutated Locus' SignalingGurkan Bebek, Vishal Patel, Mark R ChanceInformation Discovery and Delivery|June 11, 2019
Network based model of social media big data predicts contagious disease diffusionLauren S Elkin, Kamil Topal, Gurkan BebekNucleic Acids Research|June 7, 2012
MAGNET: MicroArray Gene expression and Network Evaluation ToolkitGeorge C Linderman, Mark R Chance, Gurkan BebekPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|March 10, 2021
Frequent Subgraph Mining of Functional Interaction Patterns Across Multiple CancersArda Durmaz, Tim A D Henderson, Gurkan BebekPlos One|March 3, 2012
Integrative genomic analysis reveals extended germline homozygosity with lung cancer risk in the PLCO cohortMohammed S Orloff, Li Zhang, Gurkan Bebek, et al.Pageof 38