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Journal of Food Protection|April 30, 2026
Kitchen sponges as reservoirs of foodborne pathogens: Microbial growth dynamics, surface cross-contamination, and hygiene implicationsSzilvia Neuhaus, Simon H Tausch, Konrad Gulich, et al.
Bioinformatics (Oxford, England)|November 1, 2016
HiLive: real-time mapping of illumina reads while sequencingMartin S Lindner, Benjamin Strauch, Jakob M Schulze, et al.
Emerging Infectious Diseases|November 20, 2019
Distantly Related Rotaviruses in Common Shrews, Germany, 2004-2014Reimar Johne, Simon H Tausch, Josephine Grützke, et al.
Bioinformatics (Oxford, England)|November 14, 2018
PAIPline: pathogen identification in metagenomic and clinical next generation sequencing samplesAndreas Andrusch, Piotr W Dabrowski, Jeanette Klenner, et al.
Microorganisms|April 3, 2021
Outcome of Different Sequencing and Assembly Approaches on the Detection of Plasmids and Localization of Antimicrobial Resistance Genes in Commensal <i>Escherichia coli</i>Katharina Juraschek, Maria Borowiak, Simon H Tausch, et al.
Life (Basel, Switzerland)|September 23, 2022
PathoLive-Real-Time Pathogen Identification from Metagenomic Illumina DatasetsSimon H Tausch, Tobias P Loka, Jakob M Schulze, et al.
Microorganisms|September 28, 2021
What WGS Reveals about <i>Salmonella enterica</i> subsp. <i>enterica</i> in Wildlife in GermanyLaura Uelze, Angelina Bloch, Maria Borowiak, et al.
Frontiers in Microbiology|October 5, 2020
German-Wide Interlaboratory Study Compares Consistency, Accuracy and Reproducibility of Whole-Genome Short Read SequencingLaura Uelze, Maria Borowiak, Markus Bönn, et al.
Viruses|October 11, 2018
Whole Genome Characterization of <i>Orthopoxvirus</i> (OPV) Abatino, a Zoonotic Virus Representing a Putative Novel Clade of Old World OrthopoxvirusesCesare E M Gruber, Emanuela Giombini, Marina Selleri, et al.
Frontiers in Microbiology|March 1, 2021
Toward an Integrated Genome-Based Surveillance of <i>Salmonella enterica</i> in GermanyLaura Uelze, Natalie Becker, Maria Borowiak, et al.
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