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Bioinformatics (Oxford, England)|August 25, 2006
Maximum likelihood of phylogenetic networksGuohua Jin, Luay Nakhleh, Sagi Snir, et al.Genome Biology and Evolution|August 2, 2011
Selection for translation efficiency on synonymous polymorphisms in recent human evolutionYedael Y Waldman, Tamir Tuller, Alon Keinan, et al.Proceedings of the National Academy of Sciences of the United States of America|February 6, 2010
Translation efficiency is determined by both codon bias and folding energyTamir Tuller, Yedael Y Waldman, Martin Kupiec, et al.Proceedings of the National Academy of Sciences of the United States of America|December 31, 2024
Predicting gene sequences with AI to study codon usage patternsTomer Sidi, Shir Bahiri-Elitzur, Tamir Tuller, et al.Bioinformatics (Oxford, England)|January 22, 2008
Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterionHadas Birin, Zohar Gal-Or, Isaac Elias, et al.BMC Bioinformatics|February 4, 2010
Comparative classification of species and the study of pathway evolution based on the alignment of metabolic pathwaysAdi Mano, Tamir Tuller, Oded Béjà, et al.Journal of the Royal Society, Interface|March 11, 2016
A model for competition for ribosomes in the cellAlon Raveh, Michael Margaliot, Eduardo D Sontag, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 26, 2017
Controllability Analysis and Control Synthesis for the Ribosome Flow ModelYoram Zarai, Michael Margaliot, Eduardo D Sontag, et al.Cancer Research|November 6, 2009
TP53 cancerous mutations exhibit selection for translation efficiencyYedael Y Waldman, Tamir Tuller, Roded Sharan, et al.Plos Computational Biology|September 13, 2011
Genome-scale analysis of translation elongation with a ribosome flow modelShlomi Reuveni, Isaac Meilijson, Martin Kupiec, et al.Pageof 17