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Biochemistry|October 1, 2003
Role of the [65-72] disulfide bond in oxidative folding of bovine pancreatic ribonuclease AHang-Cheol Shin, Mahesh Narayan, Myeong-Cheol Song, et al.Journal of Computational Chemistry|August 10, 2005
Protein structure prediction with the UNRES force-field using Replica-Exchange Monte Carlo-with-Minimization; Comparison with MCM, CSA, and CFMCMarian Nanias, Maurizio Chinchio, Stanisław Ołdziej, et al.Physical Review Letters|March 19, 2013
Mean-field interactions between nucleic-acid-base dipoles can drive the formation of a double helixYi He, Maciej Maciejczyk, Stanisław Ołdziej, et al.Proceedings of the National Academy of Sciences of the United States of America|March 23, 2011
Assessing the fractions of tautomeric forms of the imidazole ring of histidine in proteins as a function of pHJorge A Vila, Yelena A Arnautova, Yury Vorobjev, et al.Proteins|February 26, 2009
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. II. Interplay of local backbone conformational dynamics and long-range hydrophobic interactions in hairpin formationAgnieszka Skwierawska, Wioletta Zmudzińska, Stanisław Ołdziej, et al.Biopolymers|July 12, 2008
Acidic-basic properties of three alanine-based peptides containing acidic and basic side chains: comparison between theory and experimentJoanna Makowska, Katarzyna Bagińska, Adam Liwo, et al.Biochemistry|September 10, 2003
Shifting the competition between the intramolecular Reshuffling reaction and the direct oxidation reaction during the oxidative folding of kinetically trapped disulfide-insecure intermediatesMahesh Narayan, Ervin Welker, Celestine Wanjalla, et al.The Journal of Physical Chemistry. B|July 21, 2006
Molecular dynamics with the united-residue model of polypeptide chains. I. Lagrange equations of motion and tests of numerical stability in the microcanonical modeMey Khalili, Adam Liwo, Franciszek Rakowski, et al.The Journal of Physical Chemistry. B|March 29, 2007
Simple physics-based analytical formulas for the potentials of mean force for the interaction of amino acid side chains in water. 2. Tests with simple spherical systemsMariusz Makowski, Adam Liwo, Katarzyna Maksimiak, et al.Pageof 26