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Briefings in Bioinformatics|April 12, 2012
A survey of error-correction methods for next-generation sequencingXiao Yang, Sriram P Chockalingam, Srinivas AluruBMC Systems Biology|August 5, 2016
SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutationsYongchao Liu, Martin Loewer, Srinivas Aluru, et al.Nucleic Acids Research|May 29, 2003
Efficient clustering of large EST data sets on parallel computersAnantharaman Kalyanaraman, Srinivas Aluru, Suresh Kothari, et al.Proceedings. IEEE Computational Systems Bioinformatics Conference|February 2, 2006
Consensus genetic maps: a graph theoretic approachBenjamin N Jackson, Srinivas Aluru, Patrick S SchnableProceedings. IEEE Computational Systems Bioinformatics Conference|February 2, 2006
Space-conserving optimal DNA-protein alignmentPang Ko, Mahesh Narayanan, Anantharaman Kalyanaraman, et al.BMC Bioinformatics|February 12, 2009
Parallel short sequence assembly of transcriptomesBenjamin G Jackson, Patrick S Schnable, Srinivas AluruIEEE/ACM Transactions on Computational Biology and Bioinformatics|May 3, 2008
Consensus genetic maps as median orders from inconsistent sourcesBenjamin N Jackson, Patrick S Schnable, Srinivas AluruNucleic Acids Research|October 9, 2012
Reverse engineering and analysis of large genome-scale gene networksManeesha Aluru, Jaroslaw Zola, Dan Nettleton, et al.Bioinformatics (Oxford, England)|June 8, 2023
MCPNet: a parallel maximum capacity-based genome-scale gene network construction frameworkTony C Pan, Sriram P Chockalingam, Maneesha Aluru, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|October 10, 2017
Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory SystemsTony Pan, Patrick Flick, Chirag Jain, et al.Pageof 40