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Hasindu Gamaarachchi

Showing results (1-10 of 29) with videos related to

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Bioinformatics (Oxford, England)|April 7, 2025
Realfreq: real-time base modification analysis for nanopore sequencingSuneth Samarasinghe, Ira Deveson, Hasindu Gamaarachchi
Scientific Reports|March 15, 2019
Featherweight long read alignment using partitioned reference indexesHasindu Gamaarachchi, Sri Parameswaran, Martin A Smith
IEEE/ACM Transactions on Computational Biology and Bioinformatics|November 20, 2018
Cache Friendly Optimisation of de Bruijn Graph Based Local Re-Assembly in Variant CallingHasindu Gamaarachchi, Arash Bayat, Bruno Gaeta, et al.
BMC Bioinformatics|January 28, 2023
DeepSelectNet: deep neural network based selective sequencing for oxford nanopore sequencingAnjana Senanayake, Hasindu Gamaarachchi, Damayanthi Herath, et al.
Scientific Reports|November 18, 2023
Efficient end-to-end long-read sequence mapping using minimap2-fpga integrated with hardware accelerated chainingKisaru Liyanage, Hiruna Samarakoon, Sri Parameswaran, et al.
Gigascience|July 3, 2023
Efficient real-time selective genome sequencing on resource-constrained devicesPo Jui Shih, Hassaan Saadat, Sri Parameswaran, et al.
Bioinformatics (Oxford, England)|May 30, 2023
Accelerated nanopore basecalling with SLOW5 data formatHiruna Samarakoon, James M Ferguson, Hasindu Gamaarachchi, et al.
Gigascience|October 16, 2025
The enduring advantages of the SLOW5 file format for raw nanopore sequencing dataHasindu Gamaarachchi, Sasha Jenner, Hiruna Samarakoon, et al.
Genome Research|May 1, 2024
Simulation of nanopore sequencing signal data with tunable parametersHasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, et al.
Gigascience|April 12, 2024
Streamlining remote nanopore data access with slow5curlBonson Wong, James M Ferguson, Jessica Y Do, et al.
Pageof 3

Showing results (1-10 of 29) with videos related to

Sort By:
Pageof 3
Bioinformatics (Oxford, England)|April 7, 2025
Realfreq: real-time base modification analysis for nanopore sequencingSuneth Samarasinghe, Ira Deveson, Hasindu Gamaarachchi
Scientific Reports|March 15, 2019
Featherweight long read alignment using partitioned reference indexesHasindu Gamaarachchi, Sri Parameswaran, Martin A Smith
IEEE/ACM Transactions on Computational Biology and Bioinformatics|November 20, 2018
Cache Friendly Optimisation of de Bruijn Graph Based Local Re-Assembly in Variant CallingHasindu Gamaarachchi, Arash Bayat, Bruno Gaeta, et al.
BMC Bioinformatics|January 28, 2023
DeepSelectNet: deep neural network based selective sequencing for oxford nanopore sequencingAnjana Senanayake, Hasindu Gamaarachchi, Damayanthi Herath, et al.
Scientific Reports|November 18, 2023
Efficient end-to-end long-read sequence mapping using minimap2-fpga integrated with hardware accelerated chainingKisaru Liyanage, Hiruna Samarakoon, Sri Parameswaran, et al.
Gigascience|July 3, 2023
Efficient real-time selective genome sequencing on resource-constrained devicesPo Jui Shih, Hassaan Saadat, Sri Parameswaran, et al.
Bioinformatics (Oxford, England)|May 30, 2023
Accelerated nanopore basecalling with SLOW5 data formatHiruna Samarakoon, James M Ferguson, Hasindu Gamaarachchi, et al.
Gigascience|October 16, 2025
The enduring advantages of the SLOW5 file format for raw nanopore sequencing dataHasindu Gamaarachchi, Sasha Jenner, Hiruna Samarakoon, et al.
Genome Research|May 1, 2024
Simulation of nanopore sequencing signal data with tunable parametersHasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, et al.
Gigascience|April 12, 2024
Streamlining remote nanopore data access with slow5curlBonson Wong, James M Ferguson, Jessica Y Do, et al.
Pageof 3