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Applied Bioinformatics|May 8, 2004
Genomic Object Net: I. A platform for modelling and simulating biopathwaysMasao Nagasaki, Atsushi Doi, Hiroshi Matsuno, et al.
Genome Informatics. International Conference on Genome Informatics|February 16, 2005
A versatile petri net based architecture for modeling and simulation of complex biological processesMasao Nagasaki, Atsushi Doi, Hiroshi Matsuno, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|August 1, 2013
Multi-omics approach for estimating metabolic networks using low-order partial correlationsMitsunori Kayano, Seiya Imoto, Rui Yamaguchi, et al.
Plos Genetics|December 3, 2015
A Simple Model-Based Approach to Inferring and Visualizing Cancer Mutation SignaturesYuichi Shiraishi, Georg Tremmel, Satoru Miyano, et al.
Bioinformatics (Oxford, England)|June 13, 2012
Statistical model-based testing to evaluate the recurrence of genomic aberrationsAtushi Niida, Seiya Imoto, Teppei Shimamura, et al.
BMC Bioinformatics|February 24, 2011
Ontology-based instance data validation for high-quality curated biological pathwaysEuna Jeong, Masao Nagasaki, Kazuko Ueno, et al.
In Silico Biology|June 23, 2006
Simulation-based validation of the p53 transcriptional activity with hybrid functional petri netAtsushi Doi, Masao Nagasaki, Hiroshi Matsuno, et al.
Genome Informatics. International Conference on Genome Informatics|June 12, 2008
Performance improvement in protein N-myristoyl classification by BONSAI with insignificant indexing symbolManabu Sugii, Ryo Okada, Hiroshi Matsuno, et al.
In Silico Biology|May 10, 2008
Cell system ontology: representation for modeling, visualizing, and simulating biological pathwaysEuna Jeong, Masao Nagasaki, Ayumu Saito, et al.
Genome Informatics. International Conference on Genome Informatics|December 20, 2005
Prediction of debacle points for robustness of biological pathways by using recurrent neural networksHironori Kitakaze, Hiroshi Matsuno, Nobuhiko Ikeda, et al.
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