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Bioinformatics (Oxford, England)|September 16, 2021
RoDiCE: robust differential protein co-expression analysis for cancer complexomeYusuke Matsui, Yuichi Abe, Kohei Uno, et al.BMC Bioinformatics|November 1, 2012
ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairsTomohiro Yasuda, Shin Suzuki, Masao Nagasaki, et al.Bioinformatics (Oxford, England)|October 6, 2005
Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide dataNaoki Nariai, Yoshinori Tamada, Seiya Imoto, et al.Bioinformatics (Oxford, England)|April 12, 2006
ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profilesRyo Yoshida, Tomoyuki Higuchi, Seiya Imoto, et al.Genome Informatics. International Conference on Genome Informatics|August 12, 2006
Automatic drawing of biological networks using cross cost and subcomponent dataMitsuru Kato, Masao Nagasaki, Atsushi Doi, et al.Genome Informatics. International Conference on Genome Informatics|June 12, 2008
Weighted lasso in graphical Gaussian modeling for large gene network estimation based on microarray dataTeppei Shimamura, Seiya Imoto, Rui Yamaguchi, et al.BMC Systems Biology|April 28, 2009
Simulation-based model checking approach to cell fate specification during Caenorhabditis elegans vulval development by hybrid functional Petri net with extensionChen Li, Masao Nagasaki, Kazuko Ueno, et al.Studies in Health Technology and Informatics|June 21, 2011
Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri NetAtsushi Doi, Masao Nagasaki, Hiroshi Matsuno, et al.Genome Informatics. International Conference on Genome Informatics|November 15, 2011
Gene regulatory network clustering for graph layout based on microarray gene expression dataKaname Kojima, Seiya Imoto, Masao Nagasaki, et al.Cancer Science|January 21, 2018
Understanding intratumor heterogeneity by combining genome analysis and mathematical modelingAtsushi Niida, Satoshi Nagayama, Satoru Miyano, et al.Pageof 56