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Molecular Biology and Evolution|September 22, 2023
Whole-genome Comparisons Identify Repeated Regulatory Changes Underlying Convergent Appendage Evolution in Diverse Fish LineagesHeidi I Chen, Yatish Turakhia, Gill Bejerano, et al.
Biorxiv : the Preprint Server for Biology|February 13, 2023
Whole-genome comparisons identify repeated regulatory changes underlying convergent appendage evolution in diverse fish lineagesHeidi I Chen, Yatish Turakhia, Gill Bejerano, et al.
Nucleic Acids Research|July 3, 2020
A fully-automated method discovers loss of mouse-lethal and human-monogenic disease genes in 58 mammalsYatish Turakhia, Heidi I Chen, Amir Marcovitz, et al.
Proceedings of the National Academy of Sciences of the United States of America|October 2, 2019
A functional enrichment test for molecular convergent evolution finds a clear protein-coding signal in echolocating bats and whalesAmir Marcovitz, Yatish Turakhia, Heidi I Chen, et al.
Genome Biology and Evolution|February 16, 2022
Champagne: Automated Whole-Genome Phylogenomic Character Matrix Method Using Large Genomic Indels for Homoplasy-Free InferenceJames K Schull, Yatish Turakhia, James A Hemker, et al.
Bioinformatics (Oxford, England)|August 31, 2023
Tracking and curating putative SARS-CoV-2 recombinants with RIVETKyle Smith, Cheng Ye, Yatish Turakhia
Proceedings of the National Academy of Sciences of the United States of America|May 2, 2025
Accurate, scalable, and fully automated inference of species trees from raw genome assemblies using ROADIESAnshu Gupta, Siavash Mirarab, Yatish Turakhia
Biorxiv : the Preprint Server for Biology|June 10, 2024
Accurate, scalable, and fully automated inference of species trees from raw genome assemblies using ROADIESAnshu Gupta, Siavash Mirarab, Yatish Turakhia
Cell Reports|October 2, 2012
A "forward genomics" approach links genotype to phenotype using independent phenotypic losses among related speciesMichael Hiller, Bruce T Schaar, Vahan B Indjeian, et al.
Bioinformatics (Oxford, England)|August 10, 2006
Branch and bound computation of exact p-valuesGill Bejerano
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