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Biorxiv : the Preprint Server for Biology|April 1, 2025
Has AlphaFold 3 Solved the Protein Folding Problem for D-Peptides?Henry Childs, Pei Zhou, Bruce R Donald
Protein Engineering, Design & Selection : PEDS|May 17, 2024
DexDesign: an OSPREY-based algorithm for designing de novo D-peptide inhibitorsNathan Guerin, Henry Childs, Pei Zhou, et al.
Biorxiv : the Preprint Server for Biology|February 26, 2024
DexDesign: A new OSPREY-based algorithm for designing <i>de novo</i> D-peptide inhibitorsNathan Guerin, Henry Childs, Pei Zhou, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 4, 2024
Protocol for Designing <i>De Novo</i> Noncanonical Peptide Binders in OSPREYHenry Childs, Nathan Guerin, Pei Zhou, et al.
Biorxiv : the Preprint Server for Biology|December 3, 2025
<i>CCK</i> * (Convex Closure <i>K</i> *): A Suite of Algorithms for the De Novo Design of L- and D-peptide BindersHenry Childs, Allen C McBride, Bruce R Donald
Proteins|January 27, 2015
Systematic solution to homo-oligomeric structures determined by NMRJeffrey W Martin, Pei Zhou, Bruce R Donald
Journal of Structural Biology: X|July 7, 2023
Discovery, characterization, and redesign of potent antimicrobial thanatin orthologs from <i>Chinavia ubica</i> and <i>Murgantia histrionica</i> targeting <i>E. coli</i> LptAKelly Huynh, Amanuel Kibrom, Bruce R Donald, et al.
Computational Systems Bioinformatics. Computational Systems Bioinformatics Conference|August 1, 2009
A Hausdorff-based NOE assignment algorithm using protein backbone determined from residual dipolar couplings and rotamer patternsJianyang Zeng, Chittaranjan Tripathy, Pei Zhou, et al.
Computational Systems Bioinformatics. Computational Systems Bioinformatics Conference|January 6, 2009
A HAUSDORFF-BASED NOE ASSIGNMENT ALGORITHM USING PROTEIN BACKBONE DETERMINED FROM RESIDUAL DIPOLAR COUPLINGS AND ROTAMER PATTERNSJianyang Michael Zeng, Chittaranjan Tripathy, Pei Zhou, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|November 1, 2011
A geometric arrangement algorithm for structure determination of symmetric protein homo-oligomers from NOEs and RDCsJeffrey W Martin, Anthony K Yan, Chris Bailey-Kellogg, et al.
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