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International Journal of Bioinformatics Research and Applications|November 13, 2015
A permutation based simulated annealing algorithm to predict pseudoknotted RNA secondary structuresHerbert H Tsang, Kay C WieseIEEE/ACM Transactions on Computational Biology and Bioinformatics|October 30, 2010
SARNA-Predict: accuracy improvement of RNA secondary structure prediction using permutation-based simulated annealingHerbert H Tsang, Kay C WieseMethods in Molecular Biology (Clifton, N.J.)|September 23, 2024
Simulated Annealing for RNA Design with SIMARDHerbert H TsangPlos One|May 7, 2019
jViz.RNA 4.0-Visualizing pseudoknots and RNA editing employing compressed tree graphsBoris Shabash, Kay C WieseBio Systems|December 4, 2003
A permutation-based genetic algorithm for the RNA folding problem: a critical look at selection strategies, crossover operators, and representation issuesKay C Wiese, Edward GlenBioinformatics (Oxford, England)|February 14, 2006
Comparison of P-RnaPredict and mfold--algorithms for RNA secondary structure predictionKay C Wiese, Andrew HendriksBMC Bioinformatics|June 1, 2017
Numerical integration methods and layout improvements in the context of dynamic RNA visualizationBoris Shabash, Kay C WieseIEEE/ACM Transactions on Computational Biology and Bioinformatics|February 26, 2016
RNA Visualization: Relevance and the Current State-of-the-Art Focusing on PseudoknotsBoris Shabash, Kay C WieseIEEE Transactions on Nanobioscience|October 14, 2005
JViz.Rna--a Java tool for RNA secondary structure visualizationKay C Wiese, Edward Glen, Anna VasudevanBioinformatics (Oxford, England)|October 31, 2021
SigTools: exploratory visualization for genomic signalsShohre Masoumi, Maxwell W Libbrecht, Kay C WiesePageof 2