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The Journal of Chemical Physics
|
July 23, 2004
Prediction of membrane protein structures by replica-exchange Monte Carlo simulations: case of two helices
Hironori Kokubo, Yuko Okamoto
Journal of Chemical Information and Modeling
|
September 14, 2017
Exploring the Stability of Ligand Binding Modes to Proteins by Molecular Dynamics Simulations: A Cross-docking Study
Kai Liu, Hironori Kokubo
Biophysical Journal
|
October 7, 2008
Analysis of helix-helix interactions of bacteriorhodopsin by replica-exchange simulations
Hironori Kokubo, Yuko Okamoto
Journal of Computer-Aided Molecular Design
|
January 4, 2019
Uncovering abnormal changes in logP after fluorination using molecular dynamics simulations
Kai Liu, Hironori Kokubo
Journal of Computer-Aided Molecular Design
|
September 2, 2020
Prediction of ligand binding mode among multiple cross-docking poses by molecular dynamics simulations
Kai Liu, Hironori Kokubo
The Journal of Physical Chemistry. B
|
April 24, 2007
Preferential solvation in urea solutions at different concentrations: properties from simulation studies
Hironori Kokubo, B Montgomery Pettitt
Journal of Chemical Theory and Computation
|
November 21, 2015
Prediction of Ligand Binding Affinity by the Combination of Replica-Exchange Method and Double-Decoupling Method
Yuko Okamoto, Hironori Kokubo, Toshimasa Tanaka
Journal of Computer-Aided Molecular Design
|
May 25, 2010
Dependency of ligand free energy landscapes on charge parameters and solvent models
Yuko Okamoto, Toshimasa Tanaka, Hironori Kokubo
Journal of Computational Chemistry
|
September 6, 2013
Two-dimensional replica-exchange method for predicting protein-ligand binding structures
Hironori Kokubo, Toshimasa Tanaka, Yuko Okamoto
Journal of Computational Chemistry
|
June 29, 2011
Ab initio prediction of protein-ligand binding structures by replica-exchange umbrella sampling simulations
Hironori Kokubo, Toshimasa Tanaka, Yuko Okamoto
Page
of 3
Search research articles
Search
Showing results (1-10 of 28) with videos related to
Sort By:
Page
of 3
The Journal of Chemical Physics
|
July 23, 2004
Prediction of membrane protein structures by replica-exchange Monte Carlo simulations: case of two helices
Hironori Kokubo, Yuko Okamoto
Journal of Chemical Information and Modeling
|
September 14, 2017
Exploring the Stability of Ligand Binding Modes to Proteins by Molecular Dynamics Simulations: A Cross-docking Study
Kai Liu, Hironori Kokubo
Biophysical Journal
|
October 7, 2008
Analysis of helix-helix interactions of bacteriorhodopsin by replica-exchange simulations
Hironori Kokubo, Yuko Okamoto
Journal of Computer-Aided Molecular Design
|
January 4, 2019
Uncovering abnormal changes in logP after fluorination using molecular dynamics simulations
Kai Liu, Hironori Kokubo
Journal of Computer-Aided Molecular Design
|
September 2, 2020
Prediction of ligand binding mode among multiple cross-docking poses by molecular dynamics simulations
Kai Liu, Hironori Kokubo
The Journal of Physical Chemistry. B
|
April 24, 2007
Preferential solvation in urea solutions at different concentrations: properties from simulation studies
Hironori Kokubo, B Montgomery Pettitt
Journal of Chemical Theory and Computation
|
November 21, 2015
Prediction of Ligand Binding Affinity by the Combination of Replica-Exchange Method and Double-Decoupling Method
Yuko Okamoto, Hironori Kokubo, Toshimasa Tanaka
Journal of Computer-Aided Molecular Design
|
May 25, 2010
Dependency of ligand free energy landscapes on charge parameters and solvent models
Yuko Okamoto, Toshimasa Tanaka, Hironori Kokubo
Journal of Computational Chemistry
|
September 6, 2013
Two-dimensional replica-exchange method for predicting protein-ligand binding structures
Hironori Kokubo, Toshimasa Tanaka, Yuko Okamoto
Journal of Computational Chemistry
|
June 29, 2011
Ab initio prediction of protein-ligand binding structures by replica-exchange umbrella sampling simulations
Hironori Kokubo, Toshimasa Tanaka, Yuko Okamoto
Page
of 3