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Biophysical Journal|January 8, 2015
Multiscale model of dynamic neuromodulation integrating neuropeptide-induced signaling pathway activity with membrane electrophysiologyHirenkumar K Makadia, Warren D Anderson, Dirk Fey, et al.Scientific Reports|November 3, 2018
Impact of measurement noise, experimental design, and estimation methods on Modular Response Analysis based network reconstructionCaterina Thomaseth, Dirk Fey, Tapesh Santra, et al.The Journal of Biological Chemistry|July 27, 2006
The galactose switch in Kluyveromyces lactis depends on nuclear competition between Gal4 and Gal1 for Gal80 bindingAlexander Anders, Hauke Lilie, Kathlen Franke, et al.Journal of Personalized Medicine|June 2, 2021
Personalized Medicine for Neuroblastoma: Moving from Static Genotypes to Dynamic Simulations of Drug ResponseJeremy Z R Han, Jordan F Hastings, Monica Phimmachanh, et al.Genome Research|September 3, 2004
A benchmark for methods in reverse engineering and model discrimination: problem formulation and solutionsAndreas Kremling, Sophia Fischer, Kapil Gadkar, et al.Journal of Immunology (Baltimore, Md. : 1950)|May 6, 2008
Dynamics of proximal signaling events after TCR/CD8-mediated induction of proliferation or apoptosis in mature CD8+ T cellsXiaoqian Wang, Luca Simeoni, Jonathan A Lindquist, et al.Clinical Pharmacology and Therapeutics|November 10, 2025
Enhancing Severe Neutropenia Prediction: PKPD-Informed Labeling for Machine Learning Models Trained on Real-World DataConor J O'Hanlon, Jonas Denck, Elif Ozkirimli, et al.Molecular Systems Biology|November 29, 2015
Frequency modulation of ERK activation dynamics rewires cell fateHyunryul Ryu, Minhwan Chung, Maciej Dobrzyński, et al.Journal of Personalized Medicine|August 26, 2022
A Systems Biology Approach to Investigate Kinase Signal Transduction Networks That Are Involved in Triple Negative Breast Cancer Resistance to CisplatinNupur Mukherjee, Alacoque Browne, Laura Ivers, et al.Plos Computational Biology|August 29, 2007
A logical model provides insights into T cell receptor signalingJulio Saez-Rodriguez, Luca Simeoni, Jonathan A Lindquist, et al.Pageof 6