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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 24, 2023
Quantifying Cell-Type-Specific Differences of Single-Cell Datasets Using Uniform Manifold Approximation and Projection for Dimension Reduction and Shapley Additive exPlanationsHong Seo Lim, Peng QiuPlos Computational Biology|February 28, 2024
Quantifying the clusterness and trajectoriness of single-cell RNA-seq dataHong Seo Lim, Peng QiuPlos Computational Biology|March 16, 2021
JSOM: Jointly-evolving self-organizing maps for alignment of biological datasets and identification of related clustersHong Seo Lim, Peng QiuCancer Informatics|February 23, 2019
Correlation Patterns Between DNA Methylation and Gene Expression in The Cancer Genome AtlasJohn Cg Spainhour, Hong Seo Lim, Soojin V Yi, et al.Stem Cells (Dayton, Ohio)|July 19, 2023
Stromal STAT5-Mediated Trophic Activity Regulates Hematopoietic Niche FactorsZhengqi Wang, Grace Emmel, Hong Seo Lim, et al.Cell Reports Methods|February 23, 2023
Embracing enzyme promiscuity with activity-based compressed biosensingBrandon Alexander Holt, Hong Seo Lim, Anirudh Sivakumar, et al.CPT: Pharmacometrics & Systems Pharmacology|October 4, 2022
Applying interpretable machine learning workflow to evaluate exposure-response relationships for large-molecule oncology drugsGengbo Liu, James Lu, Hong Seo Lim, et al.Cytometry. Part a : the Journal of the International Society for Analytical Cytology|February 25, 2017
Toward deterministic and semiautomated SPADE analysisPeng QiuCytometry. Part a : the Journal of the International Society for Analytical Cytology|March 11, 2015
Computational prediction of manually gated rare cells in flow cytometry dataPeng QiuPageof 40