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Journal of Proteome Research|March 8, 2008
A hybrid method for peptide identification using integer linear optimization, local database search, and quadrupole time-of-flight or OrbiTrap tandem mass spectrometryPeter A DiMaggio, Christodoulos A Floudas, Bingwen Lu, et al.
Analytical Chemistry|February 16, 2008
Improving protein identification sensitivity by combining MS and MS/MS information for shotgun proteomics using LTQ-Orbitrap high mass accuracy dataBingwen Lu, Akira Motoyama, Cristian Ruse, et al.
Analytical Chemistry|December 28, 2019
Improving Proteomics Data Reproducibility with a Dual-Search StrategyCarolina Fernández-Costa, Salvador Martínez-Bartolomé, Daniel McClatchy, et al.
Analytical Chemistry|February 28, 2004
Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptidesDavid L Tabb, Yingying Huang, Vicki H Wysocki, et al.
Biochemical and Biophysical Research Communications|April 9, 2011
Mitotic kinases regulate MT-polymerizing/MT-bundling activity of DDA3Chang-Young Jang, Judith A Coppinger, John R Yates, et al.
Methods in Molecular Biology (Clifton, N.J.)|September 13, 2011
Isolation of focal adhesion proteins for biochemical and proteomic analysisJean-Cheng Kuo, Xuemei Han, John R Yates, et al.
Proteomics|September 10, 2008
Strategies for shotgun identification of integral membrane proteins by tandem mass spectrometryBingwen Lu, Daniel B McClatchy, Jin Young Kim, et al.
Eukaryotic Cell|February 17, 2009
Hog1 mitogen-activated protein kinase (MAPK) interrupts signal transduction between the Kss1 MAPK and the Tec1 transcription factor to maintain pathway specificityTeresa R Shock, James Thompson, John R Yates, et al.
Biochemical and Biophysical Research Communications|February 2, 2010
Phospho-regulation of DDA3 function in mitosisChang-Young Jang, Judith A Coppinger, John R Yates, et al.
The EMBO Journal|August 5, 2005
Molecular analysis of kinetochore architecture in fission yeastXingkun Liu, Ian McLeod, Scott Anderson, et al.
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