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Methods in Molecular Biology (Clifton, N.J.)|August 8, 2025
NGP: A Tool to Detect Noncoding RNA-Gene Regulatory Pairs from Transcriptomic DataHongjie Ke, Tianzhou MaJournal of the Royal Statistical Society. Series C, Applied Statistics|March 17, 2025
Multivariate Bayesian variable selection for multi-trait genetic fine mappingTravis Canida, Hongjie Ke, Shuo Chen, et al.Briefings in Bioinformatics|June 18, 2024
dCCA: detecting differential covariation patterns between two types of high-throughput omics dataHwiyoung Lee, Tianzhou Ma, Hongjie Ke, et al.Scientific Reports|February 6, 2021
Detecting survival-associated biomarkers from heterogeneous populationsTakumi Saegusa, Zhiwei Zhao, Hongjie Ke, et al.Bioinformatics (Oxford, England)|July 20, 2022
High-dimension to high-dimension screening for detecting genome-wide epigenetic and noncoding RNA regulators of gene expressionHongjie Ke, Zhao Ren, Jianfei Qi, et al.Frontiers in Genetics|July 19, 2021
Biomarker Categorization in Transcriptomic Meta-Analysis by Concordant Patterns With Application to Pan-Cancer StudiesZhenyao Ye, Hongjie Ke, Shuo Chen, et al.Genes|January 21, 2022
Meta-Analysis of Transcriptome-Wide Association Studies across 13 Brain Tissues Identified Novel Clusters of Genes Associated with Nicotine AddictionZhenyao Ye, Chen Mo, Hongjie Ke, et al.Addictive Behaviors Reports|November 28, 2025
Effects of HIV and alcohol stigma on biomarker-confirmed alcohol use following a peer-delivered intervention in South AfricaJennifer M Belus, Morgan S Anvari, Hongjie Ke, et al.Science China. Life Sciences|October 19, 2014
Incorporating functional annotation information in prioritizing disease associated SNPs from genome wide association studiesLin Hou, TianZhou Ma, HongYu ZhaoBriefings in Bioinformatics|November 16, 2024
TIPS: a novel pathway-guided joint model for transcriptome-wide association studiesNeng Wang, Zhenyao Ye, Tianzhou MaPageof 9