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Systematic Biology|May 30, 2019
The Relative Importance of Modeling Site Pattern Heterogeneity Versus Partition-Wise Heterotachy in Phylogenomic InferenceHuai-Chun Wang, Edward Susko, Andrew J RogerMolecular Phylogenetics and Evolution|August 29, 2016
Split-specific bootstrap measures for quantifying phylogenetic stability and the influence of taxon selectionHuai-Chun Wang, Edward Susko, Andrew J RogerBiochemical and Biophysical Research Communications|February 28, 2006
On the correlation between genomic G+C content and optimal growth temperature in prokaryotes: data quality and confounding factorsHuai-Chun Wang, Edward Susko, Andrew J RogerMolecular Biology and Evolution|January 21, 2014
An amino acid substitution-selection model adjusts residue fitness to improve phylogenetic estimationHuai-Chun Wang, Edward Susko, Andrew J RogerMolecular Biology and Evolution|February 24, 2011
Fast statistical tests for detecting heterotachy in protein evolutionHuai-Chun Wang, Edward Susko, Andrew J RogerBMC Evolutionary Biology|September 10, 2009
PROCOV: maximum likelihood estimation of protein phylogeny under covarion models and site-specific covarion pattern analysisHuai-Chun Wang, Edward Susko, Andrew J RogerJournal of Molecular Evolution|April 19, 2013
The site-wise log-likelihood score is a good predictor of genes under positive selectionHuai-Chun Wang, Edward Susko, Andrew J RogerJournal of Molecular Evolution|December 15, 2007
Topological estimation biases with covarion evolutionHuai-Chun Wang, Edward Susko, Matthew Spencer, et al.Molecular Biology and Evolution|October 24, 2006
Testing for covarion-like evolution in protein sequencesHuai-Chun Wang, Matthew Spencer, Edward Susko, et al.BMC Evolutionary Biology|December 18, 2008
A class frequency mixture model that adjusts for site-specific amino acid frequencies and improves inference of protein phylogenyHuai-Chun Wang, Karen Li, Edward Susko, et al.Pageof 21