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Genome Biology|July 29, 2020
Bovine breed-specific augmented reference graphs facilitate accurate sequence read mapping and unbiased variant discoveryDanang Crysnanto, Hubert PauschBMC Genomics|September 5, 2019
Multi-trait meta-analyses reveal 25 quantitative trait loci for economically important traits in Brown Swiss cattleZih-Hua Fang, Hubert PauschGenetics, Selection, Evolution : GSE|May 17, 2019
Accurate sequence variant genotyping in cattle using variation-aware genome graphsDanang Crysnanto, Christine Wurmser, Hubert PauschBMC Research Notes|June 28, 2017
The effect of mislabeled phenotypic status on the identification of mutation-carriers from SNP genotypes in dairy cattleStefano Biffani, Hubert Pausch, Hermann Schwarzenbacher, et al.Genetics, Selection, Evolution : GSE|May 11, 2023
The size and composition of haplotype reference panels impact the accuracy of imputation from low-pass sequencing in cattleAudald Lloret-Villas, Hubert Pausch, Alexander S LeonardGenetics, Selection, Evolution : GSE|February 18, 2016
A multi-trait meta-analysis with imputed sequence variants reveals twelve QTL for mammary gland morphology in Fleckvieh cattleHubert Pausch, Reiner Emmerling, Hermann Schwarzenbacher, et al.Genome Research|February 14, 2024
Pangenome-genotyped structural variation improves molecular phenotype mapping in cattleAlexander S Leonard, Xena M Mapel, Hubert PauschBMC Genomics|August 1, 2024
RNA-DNA differences in variant calls from cattle tissues result in erroneous eQTLsAlexander S Leonard, Xena M Mapel, Hubert PauschBMC Genomics|January 10, 2020
Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing dataMeenu Bhati, Naveen Kumar Kadri, Danang Crysnanto, et al.BMC Bioinformatics|December 31, 2025
PG-SCUnK: measuring pangenome graph representativeness using single-copy and universal K-mersTristan Cumer, Sotiria Milia, Alexander S Leonard, et al.Pageof 9