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Nature Reviews. Genetics|July 16, 2026
Building and applying pangenome references to capture genetic diversityHufsah Ashraf, Daniel Doerr, Jana Ebler, et al.
Bioinformatics Advances|November 6, 2023
Allele detection using k-mer-based sequencing error profilesHufsah Ashraf, Jana Ebler, Tobias Marschall
Bioinformatics (Oxford, England)|February 8, 2017
Genotyping inversions and tandem duplicationsJana Ebler, Alexander Schönhuth, Tobias Marschall
Bioinformatics (Oxford, England)|July 8, 2022
BubbleGun: enumerating bubbles and superbubbles in genome graphsFawaz Dabbaghie, Jana Ebler, Tobias Marschall
Genome Biology|June 5, 2019
Haplotype-aware diplotyping from noisy long readsJana Ebler, Marina Haukness, Trevor Pesout, et al.
Algorithms for Molecular Biology : AMB|September 29, 2023
Constructing founder sets under allelic and non-allelic homologous recombinationKonstantinn Bonnet, Tobias Marschall, Daniel Doerr
Genome Biology|April 30, 2023
Inversion polymorphism in a complete human genome assemblyDavid Porubsky, William T Harvey, Allison N Rozanski, et al.
Biorxiv : the Preprint Server for Biology|April 25, 2024
Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes ProjectSiegfried Schloissnig, Samarendra Pani, Bernardo Rodriguez-Martin, et al.
Bioinformatics (Oxford, England)|December 3, 2024
Panacus: fast and exact pangenome growth and core size estimationLuca Parmigiani, Erik Garrison, Jens Stoye, et al.
Biorxiv : the Preprint Server for Biology|June 25, 2024
Panacus: fast and exact pangenome growth and core size estimationLuca Parmigiani, Erik Garrison, Jens Stoye, et al.
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