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Briefings in Bioinformatics|August 23, 2024
DeepBAM: a high-accuracy single-molecule CpG methylation detection tool for Oxford nanopore sequencingXin Bai, Hui-Cong Yao, Bo Wu, et al.
Frontiers in Genetics|January 29, 2026
Bream: an open-source deep learning framework for simultaneous base calling and DNA methylation detection on novel nanopore sequencing platformsHui-Cong Yao, Bo Wu, Chen-Liang Ye, et al.
Nature Communications|April 4, 2025
Accurate cross-species 5mC detection for Oxford Nanopore sequencing in plants with DeepPlantHe-Xu Chen, Zhen-Dong Liu, Xin Bai, et al.
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