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Proteins|November 9, 2010
Effect of using suboptimal alignments in template-based protein structure predictionHao Chen, Daisuke KiharaScientific Reports|June 21, 2019
Computational identification of protein-protein interactions in model plant proteomesZiyun Ding, Daisuke KiharaOmics : a Journal of Integrative Biology|April 7, 2007
Comparative genomics of small RNAs in bacterial genomesStan Luban, Daisuke KiharaJournal of Molecular Biology|September 11, 2022
Domain-Based Protein Docking with Extremely Large Conformational ChangesCharles Christoffer, Daisuke KiharaNature Communications|April 26, 2018
De novo main-chain modeling for EM maps using MAINMASTGenki Terashi, Daisuke KiharaJournal of Structural Biology|August 4, 2018
De novo main-chain modeling with MAINMAST in 2015/2016 EM Model ChallengeGenki Terashi, Daisuke KiharaJournal of Computational Chemistry|April 27, 2022
Using steered molecular dynamic tension for assessing quality of computational protein structure modelsLyman Monroe, Daisuke KiharaMethods in Molecular Biology (Clifton, N.J.)|July 5, 2020
IDP-LZerD: Software for Modeling Disordered Protein InteractionsCharles Christoffer, Daisuke KiharaBMC Bioinformatics|April 28, 2012
Constructing patch-based ligand-binding pocket database for predicting function of proteinsLee Sael, Daisuke KiharaProteins|October 13, 2011
A novel method for protein-protein interaction site prediction using phylogenetic substitution modelsDavid La, Daisuke KiharaPageof 26